G167171


Basic Information

Item Value
gene id G167171
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 3744075 ~ 3781902 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU189912
CACGACACAGTTCCTCAACAACCGTCCATACCGGCGTGATGAATACGATCCTCAATTGGATGGAACTGAAATAAATACTTTTAATGTTGCGATCCTATTGGACTTATGATAGCAACCTGAATTGTAACAAAGCACTGTTGGCCAGAGGAGAACTGGCACCCCGACTAAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCATTTTAACACCAATTTGCCACTTGTCTGCCACCTGATGTCACCTGATGGAGTTTGGGTTCCTTGCCGCTGTCGCCTCTGGCTTGCTTAGTTAGGGACACTTGACTTGACATTTTGATATTCAACAGTGCTTTGATCTGCCTGCATTGACACTATTCTTTAAGAGCTGCTGTGCAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189912 True 374 lncRNA 0.45 2 3744075 3781902

Neighbor

gene id symbol gene type direction distance location
CI01000032_03535729_03536058 NA coding upstream 207212 3535729 ~ 3536863 (+)
CI01000032_03326549_03327076 NA coding upstream 415211 3326549 ~ 3328864 (+)
CI01000032_03323107_03325296 NA coding upstream 418438 3323107 ~ 3325637 (+)
CI01000032_03210864_03212974 TMEM129 coding upstream 529911 3210864 ~ 3214164 (+)
CI01000032_03168377_03169554 NA coding upstream 574328 3168281 ~ 3169747 (+)
CI01000032_03959089_03961976 NA coding downstream 177037 3958939 ~ 3962210 (+)
CI01000032_04115597_04116265 NA coding downstream 333695 4115597 ~ 4116316 (+)
CI01000032_04142554_04144115 NA coding downstream 357384 4139286 ~ 4144298 (+)
G167077 NA non-coding upstream 54945 3609598 ~ 3689130 (+)
G167111 NA non-coding upstream 89621 3654128 ~ 3654454 (+)
G167039 NA non-coding upstream 197832 3545553 ~ 3546243 (+)
G166974 NA non-coding upstream 302083 3441708 ~ 3441992 (+)
G167196 NA non-coding downstream 12134 3794036 ~ 3822269 (+)
G167221 NA non-coding downstream 47600 3829502 ~ 3831894 (+)
G167225 NA non-coding downstream 56655 3838557 ~ 3839052 (+)
G167231 NA non-coding downstream 64414 3846316 ~ 3850863 (+)
G167250 NA non-coding downstream 96328 3878230 ~ 3878566 (+)
G166765 NA other upstream 786862 2956788 ~ 2957213 (+)
G166734 NA other upstream 894391 2835314 ~ 2849684 (+)
CI01000032_02773889_02774396 NA other upstream 968027 2773889 ~ 2774501 (+)
CI01000032_01698448_01701006 NA other upstream 2042787 1698448 ~ 1701288 (+)
G165570 NA other upstream 2386508 1349578 ~ 1357567 (+)

Expression


Co-expression Network