G167039


Basic Information

Item Value
gene id G167039
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 3545553 ~ 3546243 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU189768
ATTTGTTCAGAGATCAAGCCTGTTGTGAGCCATCAGCAAGTTCTGAGAAATAATTTGACCATAAGATCCATCTTAAGTCATTTATTAAACCTAGCTGTACGCTATACACCTAGTTGCCCACTGTGCCTTCAGCTCCAAATTCTGTTTGATCTTGCATCAGAATGCTCAACCTAACTGCCCAGATGGCAGACCAAAGGACTGGCTAGGTGTTGTGAGGAACACCCTCCTAACCAGGGCTGCTGATCACTTGCAGCACCAGAGCCAAAAGCAACTGGACAACGATGGAAGAGAAGTAAAGGCAGATGACTCAAACCAGAGGTATGATCACAAAGATCTGACTGAGGTCAACTTCTTCCTGGCCCACAACCTCACAGGTTTGAAACAGAAGGTAAACAACCTCAAACTCCAGATCGCAGAATCTCAGAGGGAGCTGACACATGCTAAAAGCCACATAGGCCAGCTAGAGATGGGGGCTCAGGACAGACACAATGTCCCTGGCAGAGTGGATTCACAGAAGAAAGTTCACAGAGTTCAAAACACCCTGACAGCTGGAAAGACAGCCAGAGAGGACCTGAAAAAGGAAAAAGGAACTATTTCACAAAGAGTCACCGTTAAAAACTGCAAATTCTGAACTCCTGGACAAAGAC

Function

NR:

description
PREDICTED: actin-related protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189768 True 647 lncRNA 0.46 2 3545553 3546243

Neighbor

gene id symbol gene type direction distance location
CI01000032_03535729_03536058 NA coding upstream 8690 3535729 ~ 3536863 (+)
CI01000032_03326549_03327076 NA coding upstream 216689 3326549 ~ 3328864 (+)
CI01000032_03323107_03325296 NA coding upstream 219916 3323107 ~ 3325637 (+)
CI01000032_03210864_03212974 TMEM129 coding upstream 331389 3210864 ~ 3214164 (+)
CI01000032_03168377_03169554 NA coding upstream 375806 3168281 ~ 3169747 (+)
CI01000032_03959089_03961976 NA coding downstream 412696 3958939 ~ 3962210 (+)
CI01000032_04115597_04116265 NA coding downstream 569354 4115597 ~ 4116316 (+)
CI01000032_04142554_04144115 NA coding downstream 593043 4139286 ~ 4144298 (+)
G166862 NA non-coding upstream 17968 3110906 ~ 3527585 (+)
G166974 NA non-coding upstream 103561 3441708 ~ 3441992 (+)
G166819 NA non-coding upstream 309986 3221575 ~ 3235567 (+)
G166816 NA non-coding upstream 324032 3214622 ~ 3221521 (+)
G167077 NA non-coding downstream 63355 3609598 ~ 3689130 (+)
G167111 NA non-coding downstream 107885 3654128 ~ 3654454 (+)
G167171 NA non-coding downstream 197832 3744075 ~ 3781902 (+)
G167179 NA non-coding downstream 216522 3762765 ~ 3767283 (+)
G167196 NA non-coding downstream 247793 3794036 ~ 3822269 (+)
G166765 NA other upstream 588340 2956788 ~ 2957213 (+)
G166734 NA other upstream 695869 2835314 ~ 2849684 (+)
CI01000032_02773889_02774396 NA other upstream 769505 2773889 ~ 2774501 (+)
CI01000032_01698448_01701006 NA other upstream 1844265 1698448 ~ 1701288 (+)
G165570 NA other upstream 2187986 1349578 ~ 1357567 (+)

Expression


Co-expression Network