G166862


Basic Information

Item Value
gene id G166862
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 3110906 ~ 3527585 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU189564
CAAATTGCTAAAAGGGACTACTTCCTTTGGTGGGGACTTTAGATGTCATCATGACAAACAGGACATTTGGACAGCATTTCTCATGAAAAAGTGGATAAGTATTCATACACAGTGCAGATCATAATCAGCAAGCATGTTTTTAAAGGGAACCCCTGGTGTTAAGACTTGTATGGCTTAATATAATGTAAATGATGTCTCTTACTGAAATATGTAGTAGAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189564 True 222 lncRNA 0.36 2 3110906 3527585

Neighbor

gene id symbol gene type direction distance location
CI01000032_03083089_03083664 NA coding upstream 26760 3081983 ~ 3084146 (+)
CI01000032_03046961_03053202 RRAGA.L, RRAGB, RRAGA, MGC78980 coding upstream 56980 3046961 ~ 3053926 (+)
CI01000032_02857743_02864895 SYBL1, VAMP7 coding upstream 245931 2856913 ~ 2864975 (+)
CI01000032_02827399_02829641 NA coding upstream 281188 2827399 ~ 2829718 (+)
CI01000032_02773889_02774396 NA coding upstream 336405 2773889 ~ 2774501 (+)
CI01000032_03535729_03536058 NA coding downstream 8144 3535729 ~ 3536863 (+)
CI01000032_03959089_03961976 NA coding downstream 431354 3958939 ~ 3962210 (+)
CI01000032_04115597_04116265 NA coding downstream 588012 4115597 ~ 4116316 (+)
CI01000032_04142554_04144115 NA coding downstream 611701 4139286 ~ 4144298 (+)
G166861 NA non-coding upstream 561 3110142 ~ 3110345 (+)
G166860 NA non-coding upstream 3755 3106747 ~ 3107151 (+)
G166853 NA non-coding upstream 18581 3092109 ~ 3092325 (+)
G166847 NA non-coding upstream 31810 3078641 ~ 3079096 (+)
G166842 NA non-coding upstream 45912 3064780 ~ 3064994 (+)
G167039 NA non-coding downstream 17968 3545553 ~ 3546243 (+)
G167077 NA non-coding downstream 82013 3609598 ~ 3689130 (+)
G167111 NA non-coding downstream 126543 3654128 ~ 3654454 (+)
G167171 NA non-coding downstream 216490 3744075 ~ 3781902 (+)
G167179 NA non-coding downstream 235180 3762765 ~ 3767283 (+)
G166765 NA other upstream 153693 2956788 ~ 2957213 (+)
G166734 NA other upstream 261222 2835314 ~ 2849684 (+)
CI01000032_01698448_01701006 NA other upstream 1409618 1698448 ~ 1701288 (+)
G165570 NA other upstream 1753339 1349578 ~ 1357567 (+)

Expression


Co-expression Network