CI01000032_03083089_03083664


Basic Information

Item Value
gene id CI01000032_03083089_03083664
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 3081983 ~ 3084146 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_03083089_03083664.mRNA
GTATATAGAATGGTGCATGCTAACGCGCTTTCGAGGCTATACAGTGGAACCTGAAAGTATGCAGCGCTTCACTTTTTCCACATTTTGTTATGTTACAGCCTTTTTCCAAAATGGATTAAATTCATTATTTTCCTCAAAATTCCACAAACAATACCCTATAATGACAATGTGAAAGAAGTTTGTTTGAAATCTTTGCAAATTTATTAAAAAAAATAAATAAATAAATCACATAAAATCACTCATTTCCTGTTGCCAGCAGGTAGCGCTATGACTAACTGAATATTGTCTAGTAGAGGTCTTCAGGCCAGGACTTTTATCACACATGTGAAGTTTGGGGCAGGTTGGACATTGTATGCCTGAGTTACAATAGCTTCCTCTTTCATGGCGAAACATCAGATTTTGTCAGTCCGCCATGGACACAGCCTTCAGCGAAAACTCAAGATCTTTGCAATTTAACATCGCTAAGGCCTTAAGATTAGACTGACCAAATATGATGTTGTTGTAGTTAAATTGCTACAAGGAGTTGATCACAGTGTAAAACATTACATTTCCTGTTGCCCGCAGGAGGCGCTATGACTGTAACTGAATGTTGGCATGTAGATGTCTGTGTGGCAGTCGTCCATGAGGGGTTGCCGTTTTTACTTTCATTTTGTTGTTTGTTTATTTTGATATATTAAAGTGATTTAAACGTTCGCTGGTTCCCGCCTCCTTCCCCGAACTAACCATGTTACAGTCAATATAATTATCATGTTATTTTATATTATTATATATTATCTGTTATATAATAGATAATATATAATAATATTATAAAATAACATAATAGACTTGTTCCGGGTGGTCCCTTCCGACTGTATGCCTGTCCGTGTCACAGTCAGGGTGAACGCAACAGGCATGTAGCGGTTGTCATCGCTGATATGCATCATGGCGGTTGTCAAGAAAAGAAAAGTAGATGCAGAATGTTGTGCTTTTCAAGAAAAAATGGACAAATGATTATTTTTTTGTTTAAGTGAAAGGCAAGCCAGTCTGCCTAGTTTGTGGGGATGCGCTTGCAGTGATGAAAAAGGTCAATATCGAGCATCATTACAGCTCGAAACATGCTAAACTGAATGGGTTGCCTGGTCAAATGTGCGTGGATCAAGTTAGTGCTCTTTGGCGGTTATTTGGTGGTTTTCACAAGGACGCATTCTGACAGAGACAATGTTACTCATGCAAGTTTTGTGGTGAGTGAGCTAATTGCTAAGAAGCTGAATCCTCATTCAGAAGGAGAATTCGTGAAAGAGTGCCTTGTTGCCGCTGCGGAACTGCTAGCACCAGACAAGGTAAAACTGTTCCAAAGTGTCAGTTTATCTCAGAGAACCATCACAGAACGAATTACCGATATTGCACAAGACATTGAAACAACACTGAAGGACACCGCAAAAAAATTCCAGTTTTTCTCTCTGGCCTGTGATGAAACAACAGATATAACAAATACAGCGCAACTAGCCAATTTTGTGCGTGGGATTACTGCTGAGTTTGATACTAGTGAGGAATTGCTGTCTATGCAAGCCATGCATGGCACTACCCGAGGTGAGGATTTATTTAAGAAAGTTGTTTTGGCAATAAACAGATTTGAACTACCATTTGAAAAGTTAAGTGGTCTTGCCACAGATGGAGCTCCAGCCATGCTTGGCACGCAATAGGGATTAACTGCATTGGTCATTGGTCTGCATTCACATGGTCAAAAAAGAAATGAGTCGTCTTAGTCTCGATCCAAGTGATTTAGTTTTATGCCACTGTATCATACATCAAGAGAGTCTGTGTGCACATTCCCTGAAGCTCTAAAGTGTGATGACAACTGTCGTTTCCACCACAAATTTCATCAAAAGCAGAGGGCTAAACAGCTGCCAGATCAAAGAGTTATTGAGTGATCTCGGGTCCAAATACGGAGATCTTGTGAGGTGTGATGGCTGAGTTGCGCAGATATGCTCGCACGGTTTTACTAACTCAGGGAAGAAGAACAATTCATGGAGATTAAGGGTAAATCAGTGATGGCAAGTGGCTGTGTGATTTGGCCTTTATGGTGGACATAACCAAGTACCTGTCAGAGCTGAACGTCAAGCTCCAAGGTCCGAACCAGCTCCTCAGCTCGCTGCTTTCAAATGTGAAATCATTCAAAGTGAAA

Function

NR:

description
putative general transcription factor II-I repeat domain containing protein 2-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_03083089_03083664.mRNA True 2164 mRNA 0.40 1 3081983 3084146

Neighbor

gene id symbol gene type direction distance location
CI01000032_03046961_03053202 RRAGA.L, RRAGB, RRAGA, MGC78980 coding upstream 28057 3046961 ~ 3053926 (+)
CI01000032_02857743_02864895 SYBL1, VAMP7 coding upstream 217008 2856913 ~ 2864975 (+)
CI01000032_02827399_02829641 NA coding upstream 252265 2827399 ~ 2829718 (+)
CI01000032_02773889_02774396 NA coding upstream 307482 2773889 ~ 2774501 (+)
CI01000032_02768103_02768518 NA coding upstream 313465 2767994 ~ 2768518 (+)
CI01000032_03142737_03156736 NA coding downstream 57596 3141742 ~ 3158789 (+)
CI01000032_03168377_03169554 NA coding downstream 84135 3168281 ~ 3169747 (+)
CI01000032_03210864_03212974 TMEM129 coding downstream 126718 3210864 ~ 3214164 (+)
CI01000032_03323107_03325296 NA coding downstream 238961 3323107 ~ 3325637 (+)
CI01000032_03326549_03327076 NA coding downstream 242403 3326549 ~ 3328864 (+)
G166847 NA non-coding upstream 2887 3078641 ~ 3079096 (+)
G166842 NA non-coding upstream 16989 3064780 ~ 3064994 (+)
G166841 NA non-coding upstream 17300 3064241 ~ 3064683 (+)
G166836 NA non-coding upstream 45506 3036167 ~ 3036477 (+)
G166835 NA non-coding upstream 46483 3035237 ~ 3035500 (+)
G166853 NA non-coding downstream 7963 3092109 ~ 3092325 (+)
G166860 NA non-coding downstream 22601 3106747 ~ 3107151 (+)
G166861 NA non-coding downstream 25996 3110142 ~ 3110345 (+)
G166862 NA non-coding downstream 26760 3110906 ~ 3527585 (+)
G166857 NA non-coding downstream 109888 3194034 ~ 3196104 (+)
G166765 NA other upstream 124770 2956788 ~ 2957213 (+)
G166734 NA other upstream 232299 2835314 ~ 2849684 (+)
CI01000032_01698448_01701006 NA other upstream 1380695 1698448 ~ 1701288 (+)
G165570 NA other upstream 1724416 1349578 ~ 1357567 (+)

Expression


Co-expression Network