G166853


Basic Information

Item Value
gene id G166853
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 3092109 ~ 3092325 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU189548
CCGCTGTCATGCAAACTCCGTCAAGTACGCCGTTTGCTGATGTTATCTCATCCCTCGCGGTCCTTCACCAAGAACAACACCAGGCATTGCTGGACCTGCGGAGCGACCAGGAGCGTCGCTTCCAAGTGATTGTGCAGGCACAACAGGAGGACCACGAGAGGTTCCGGAGCTGGATGGACCGGGGTGGCTCAGGTCAGGACTATGCTGCCGCTCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189548 True 217 lncRNA 0.59 1 3092109 3092325

Neighbor

gene id symbol gene type direction distance location
CI01000032_03083089_03083664 NA coding upstream 7963 3081983 ~ 3084146 (+)
CI01000032_03046961_03053202 RRAGA.L, RRAGB, RRAGA, MGC78980 coding upstream 38183 3046961 ~ 3053926 (+)
CI01000032_02857743_02864895 SYBL1, VAMP7 coding upstream 227134 2856913 ~ 2864975 (+)
CI01000032_02827399_02829641 NA coding upstream 262391 2827399 ~ 2829718 (+)
CI01000032_02773889_02774396 NA coding upstream 317608 2773889 ~ 2774501 (+)
CI01000032_03142737_03156736 NA coding downstream 49417 3141742 ~ 3158789 (+)
CI01000032_03168377_03169554 NA coding downstream 75956 3168281 ~ 3169747 (+)
CI01000032_03210864_03212974 TMEM129 coding downstream 118539 3210864 ~ 3214164 (+)
CI01000032_03323107_03325296 NA coding downstream 230782 3323107 ~ 3325637 (+)
CI01000032_03326549_03327076 NA coding downstream 234224 3326549 ~ 3328864 (+)
G166847 NA non-coding upstream 13013 3078641 ~ 3079096 (+)
G166842 NA non-coding upstream 27115 3064780 ~ 3064994 (+)
G166841 NA non-coding upstream 27426 3064241 ~ 3064683 (+)
G166836 NA non-coding upstream 55632 3036167 ~ 3036477 (+)
G166835 NA non-coding upstream 56609 3035237 ~ 3035500 (+)
G166860 NA non-coding downstream 14422 3106747 ~ 3107151 (+)
G166861 NA non-coding downstream 17817 3110142 ~ 3110345 (+)
G166862 NA non-coding downstream 18581 3110906 ~ 3527585 (+)
G166857 NA non-coding downstream 101709 3194034 ~ 3196104 (+)
G166816 NA non-coding downstream 122297 3214622 ~ 3221521 (+)
G166765 NA other upstream 134896 2956788 ~ 2957213 (+)
G166734 NA other upstream 242425 2835314 ~ 2849684 (+)
CI01000032_01698448_01701006 NA other upstream 1390821 1698448 ~ 1701288 (+)
G165570 NA other upstream 1734542 1349578 ~ 1357567 (+)

Expression


Co-expression Network