CI01000032_03210864_03212974 (TMEM129)


Basic Information

Item Value
gene id CI01000032_03210864_03212974
gene name TMEM129
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 3210864 ~ 3214164 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_03210864_03212974.mRNA
GATACTACATAGGAATGTGTTTTGCTGCTCCTGAACAGAATCTCATGTACATCCATCATGCAAGTCAGGGATGGCAAATATACTTTGGGTTGTCACTGGCCATCCAGCTTTTGAGTTGTGCACTTGCTTTCTATTGGTCCAGACGTGGATGGGCGAATCATCCGATATGTCAGGCGCTCAGCACACATGCCTTACCACACTCCAGCTGGAGGGCCGTTGCCTCATCCATCAACACAGAGTTTCGCCGCATCGATAAATTTGCTTCCGGTTCTTCTAGTGCGAGAGTGATTGTCACTGATACTTGGGTGATGAAGGTCACGACGTACTCCTTGCGTGTTGCCTTGCATCAGGACTGTCATCTGACTGTCACAGACTCCAAGCATCACAGCCTATCGGCTGAATTGAACACGCCGGTGCAAATTGTCACTATCACTGTTGCCAGTATCAATCCCAGAGTCAAGCCTTTTGACATAAGGCTGAAATCCACCGAATATGTTGAGCTGCAAGAGAAACTGCACGCACCCATCAGAAACGCCGCCAATGTTGTCATCCATTTGACAATGAGTGAGCTGTTTTTGGAGACGTTTAAGTCATATGTGAGGTTGAATGAAGTCTACAGGTGTCCAAGTGGCCAGGAACTTGAACCGTGTATTGGATGTATGCAAGTCAATGCCAACGTGAAGCTTCTGCGACTGTGCCAGGGAGACAGTGAAGGCGAATGCCAGCAGTGCTACTGCCGCCCCATGTGGTGCCTCACATGTATGGGCAAATGGTTTGCCAGTCGTCAGGACCAGCAGCAGCCGGAGACATGGCTGAGCAGCAGGGCCTTTACGACACTGAACCTGATATTTCTGAGCACTTCTGTTTGCTTTTTCAAAACCTTTGTGCCTCCCAAGCTACAAACATATCCAATGACAGTGAATTGCATGTCCAGGAAAAGCCAGAAGAAACAATACATTTGATTTTGCTTAAGCATAGTTTAAAAAAGAAAAGAAAAAAATCTGTATTTTTTTCCATGTTTTTTAACTGTTATGCAGATTTGCCCTCCATTTCTCACTGCAATATTGCAAAAATCTCATTCTTAATACTGTATGGGCAAAATTTTATGAATGTATTTCATATACCATCATTGTAATATTAGTTGCAATTGTTTTACAGTATTTGTTTCTTTTGGAGGGAATGTGCCTAAAGTCATGAAAATGCTGTCACAGTGCAAATGATCTTAATGGCAGAACTCAACACTAAGGATGGCCTGATGGCCTTGCTGACTTGGGGTCAGTGTGAAAGAGTGTCAGGCCACTTGCAAACTCAAGCTTAAACGTATAATGTTACAAAGATAATGTTTTCTAGACATAGATGGGATTTTGTTAAAATTGTAAAAATGTCTTGTGATAGTCTTGAAAGCAACAGTAAGAATGTTGTACAACAGTGTGTTGATGAATCAATGGAGTCTAGTTTGTTTCTAGTTTGTTGCATTTTTTTTGTAAGTATTTCAAGTATGAAAAACTGTAATTGCTAAAATTGACCATAGATGGTAATTTTTTGACATGAAATATGAGCTGGGCGCTTTTTGTGAGATTCACGGGCCTCATTTATGAAGCGTGTGTACGCGTAAATCCACGCCAACGCTCATATTTATAAAAAGTGTCTTTGACGTGGAAGAGTGCTTAGCGCCACGTCAGGGTCTGAGCAGACGTAAGCACCTTTCCTTGTCAGGGTACTGCAGGTTTCTAAGCTATTCTTGCAGCTCGCCATTTAATATTTGGACTGGTGATTTTTTTTTATTTTTTTTTTATAAATGTAAATTACATTAATTAGACATCATTTAAGAGGCGGAGAACTGAAACCATTCAGCTGCGCACAAGTTCAAAATCATTTGCGATTTATAGATTTGGCAATTCACATCTGAAAGAGAGGTGTGCACGCTTTTTCTGTGCGTACGTTCATTCTATGAATCACAAGTACGCACAATTGAAAAATGATTGTAAGATCAAATGTAGGACAGTTTTTACGCAACATTTTACAAATTAAGCCCCCTATTTTTATAGCAGATTACAAAACAAATTTATAGAAACAGCATACAAAATATTCATATACTTTGATCACATGCACCTTGCCTTAAATCAAACTTTCATGTTGCTTCATTCTTGTA

Function

symbol description
tmem129 Predicted to enable ubiquitin protein ligase activity. Predicted to act upstream of or within protein ubiquitination and response to unfolded protein. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human TMEM129 (transmembrane protein 129, E3 ubiquitin ligase).

GO:

id name namespace
GO:0070737 protein-glycine ligase activity, elongating molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_03210864_03212974.mRNA True 2152 mRNA 0.41 4 3210864 3214164

Neighbor

gene id symbol gene type direction distance location
CI01000032_03168377_03169554 NA coding upstream 41117 3168281 ~ 3169747 (+)
CI01000032_03142737_03156736 NA coding upstream 52075 3141742 ~ 3158789 (+)
CI01000032_03083089_03083664 NA coding upstream 126718 3081983 ~ 3084146 (+)
CI01000032_03046961_03053202 RRAGA.L, RRAGB, RRAGA, MGC78980 coding upstream 156938 3046961 ~ 3053926 (+)
CI01000032_02857743_02864895 SYBL1, VAMP7 coding upstream 345889 2856913 ~ 2864975 (+)
CI01000032_03323107_03325296 NA coding downstream 108943 3323107 ~ 3325637 (+)
CI01000032_03326549_03327076 NA coding downstream 112385 3326549 ~ 3328864 (+)
CI01000032_03535729_03536058 NA coding downstream 321565 3535729 ~ 3536863 (+)
CI01000032_03959089_03961976 NA coding downstream 744775 3958939 ~ 3962210 (+)
CI01000032_04115597_04116265 NA coding downstream 901433 4115597 ~ 4116316 (+)
G166857 NA non-coding upstream 14760 3194034 ~ 3196104 (+)
G166861 NA non-coding upstream 100519 3110142 ~ 3110345 (+)
G166860 NA non-coding upstream 103713 3106747 ~ 3107151 (+)
G166853 NA non-coding upstream 118539 3092109 ~ 3092325 (+)
G166847 NA non-coding upstream 131768 3078641 ~ 3079096 (+)
G166816 NA non-coding downstream 458 3214622 ~ 3221521 (+)
G166819 NA non-coding downstream 7411 3221575 ~ 3235567 (+)
G166974 NA non-coding downstream 227544 3441708 ~ 3441992 (+)
G167039 NA non-coding downstream 331389 3545553 ~ 3546243 (+)
G166765 NA other upstream 253651 2956788 ~ 2957213 (+)
G166734 NA other upstream 361180 2835314 ~ 2849684 (+)
CI01000032_02773889_02774396 NA other upstream 434816 2773889 ~ 2774501 (+)
CI01000032_01698448_01701006 NA other upstream 1509576 1698448 ~ 1701288 (+)
G165570 NA other upstream 1853297 1349578 ~ 1357567 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_007144 tmem129 coding NC_007125.7 CM002898.2 9581896 ~ 9592830 (+)