CI01000032_03535729_03536058


Basic Information

Item Value
gene id CI01000032_03535729_03536058
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 3535729 ~ 3536863 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_03535729_03536058.mRNA
CTTTATGCTCTTTATGGTATAGTCAGTACCTCACACCTCAGACTGATTTGGGAAACAGATTTCGGGGTGGATATTTTGGTAGAGGAGTGGGAGATGGTCTGGTCCCACACCAAAAGACTTTCAGTATGTAATAGGGCAAGAGCCATTCAGCTTAGAATCCTGCACAGAATACATATTACACCTCATATAAGAAACAAATACAATTCAAGTCTTTCACTGCTCTGCCCTAAACGCAAGTCTGATATAGGAGATTATACTCATTGTATATGGGACTGTCATGTGATCCAGGGTTACTGGTCCAATCCAATCCAATCCACTTTATTTCTATAGCACATTTTACCAACAACAAACAGTCTCCAAAGTGCTGCACAAGAAAAAAAAAAAAAAAAAAAAAAAAAAATGGTCTAATTAACTTCACTAGCCAAATAAGTAAAATAAATAAAAATAAATAAATAAAAAAAACCACCACAGTCTGGGGCCGACCACAGAGAAGGCCCGGTCCCCACTGGTTTTAAGTCTGGCCTTAGGAACTTCGAGCTGGAGCTGGCGCTCAGACCTCAGTGAACGCGCCGGTGTGTAAATTTGGATGAGGTCCGTGATGTACTGAGGGGCCAGTCCAGAGTTGTGGTTCAATTAAATAATATCTTGGGATTGACTTTGGGGTTAGATCCTTTGTCACTCATTCTGGTTTTCCCTGTAAGCTCATTTCTAGCAAATATAAAAGACGTCTTTTTAGCTTGTTAACTTTTGCTGCCAGAAAGAATCTACTGATGTCATGGATCAGCGATAAGCCTCCCTCCATTAAAGAATGGCATTCAATTATTAGAGAGACTATTCCCCTGGAACTCTTGACATGCATTATCTACTCAACAACTGACAACAACTTTTAACCGCATATGGACACCATACCTTGATAGCATCAGTGCCTCTATCAGTGATATTCTGTGGTATAGTATGACATAACGTTCCAGAAGTGACTAGATATCATGTGTATTCTCCTCAGTCTTGATGATCCAATTGCACATCTCAATCTGTTGTCATCTTATGTACATTTCTGTTTGTGTATCCCCTTTGTTGTGTGTCAGGCAATTTGTCTTTGTTATTTTGTTTTTGTTGTAATTTGTTAAAGTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_03535729_03536058.mRNA True 1135 mRNA 0.39 1 3535729 3536863

Neighbor

gene id symbol gene type direction distance location
CI01000032_03326549_03327076 NA coding upstream 206865 3326549 ~ 3328864 (+)
CI01000032_03323107_03325296 NA coding upstream 210092 3323107 ~ 3325637 (+)
CI01000032_03210864_03212974 TMEM129 coding upstream 321565 3210864 ~ 3214164 (+)
CI01000032_03168377_03169554 NA coding upstream 365982 3168281 ~ 3169747 (+)
CI01000032_03142737_03156736 NA coding upstream 376940 3141742 ~ 3158789 (+)
CI01000032_03959089_03961976 NA coding downstream 422076 3958939 ~ 3962210 (+)
CI01000032_04115597_04116265 NA coding downstream 578734 4115597 ~ 4116316 (+)
CI01000032_04142554_04144115 NA coding downstream 602423 4139286 ~ 4144298 (+)
G166862 NA non-coding upstream 8144 3110906 ~ 3527585 (+)
G166974 NA non-coding upstream 93737 3441708 ~ 3441992 (+)
G166819 NA non-coding upstream 300162 3221575 ~ 3235567 (+)
G166816 NA non-coding upstream 314208 3214622 ~ 3221521 (+)
G167039 NA non-coding downstream 8690 3545553 ~ 3546243 (+)
G167077 NA non-coding downstream 72735 3609598 ~ 3689130 (+)
G167111 NA non-coding downstream 117265 3654128 ~ 3654454 (+)
G167171 NA non-coding downstream 207212 3744075 ~ 3781902 (+)
G167179 NA non-coding downstream 225902 3762765 ~ 3767283 (+)
G166765 NA other upstream 578516 2956788 ~ 2957213 (+)
G166734 NA other upstream 686045 2835314 ~ 2849684 (+)
CI01000032_02773889_02774396 NA other upstream 759681 2773889 ~ 2774501 (+)
CI01000032_01698448_01701006 NA other upstream 1834441 1698448 ~ 1701288 (+)
G165570 NA other upstream 2178162 1349578 ~ 1357567 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G147645 NA non-coding NC_053125.1 CM020922.1 29964680 ~ 30129654 (-)