CI01000032_02768103_02768518


Basic Information

Item Value
gene id CI01000032_02768103_02768518
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2767994 ~ 2768518 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_02768103_02768518.mRNA
ATACAAAACTATACGTGTGGCTCAGCGCTTCTCAGCTTGTTCTGTGCTTCCACCCACTCCCAGTCCTTTGCCTGCCTCACCATCTGTCGCCCCTCCAGCACCTGAACAAATGCAGGAAGATTCCTTCCGCCTCACCCGAGCGGAGCGTCAGAGAAGAATTCAACAACGACTGTGTCTCTACTGTGGGGGAGAAGGATATGTCATCGCCGTGTGTCCCATCCGACCACCACGCCCAGCGGTGAGTACTATTCAAGTTCCAGCTTGTATTGCACCTCTTACAAGAACTAAAGTCCAACTGTTAAACTCTCACGTCTGTGTTTCAGCGCAAGCCCTCCTAGACTCTGGATCAGCTGGAAACTTCATCAGAGCCCAAGTTCTTCAGAAACTAAACGTACGCCGAAAACGATGTCAACAAGATCTACAGATCCAAACTATCCAAGGAAAGCCGCTGGGCCGTGGTCGCATCACACACTTCTCTCCCACACTGATGCTCCGTATCGGCTGCCTGCATTCTGAGGAGATAAC

Function

NR:

description
gag polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_02768103_02768518.mRNA True 525 mRNA 0.51 1 2767994 2768518

Neighbor

gene id symbol gene type direction distance location
CI01000032_02660718_02684072 ARHGEF9 coding upstream 83776 2660718 ~ 2684218 (+)
CI01000032_02631785_02635555 NA coding upstream 132009 2630508 ~ 2635985 (+)
CI01000032_02593980_02599978 ASB12B coding upstream 167464 2593006 ~ 2600530 (+)
CI01000032_02522753_02527262 FAM46D coding upstream 240168 2522753 ~ 2527826 (+)
CI01000032_02451472_02465595 TBX22 coding upstream 301616 2451472 ~ 2466378 (+)
CI01000032_02773889_02774396 NA coding downstream 5371 2773889 ~ 2774501 (+)
CI01000032_02827399_02829641 NA coding downstream 58881 2827399 ~ 2829718 (+)
CI01000032_02857743_02864895 SYBL1, VAMP7 coding downstream 88395 2856913 ~ 2864975 (+)
CI01000032_03046961_03053202 RRAGA.L, RRAGB, RRAGA, MGC78980 coding downstream 278443 3046961 ~ 3053926 (+)
CI01000032_03083089_03083664 NA coding downstream 313465 3081983 ~ 3084146 (+)
G165847 NA non-coding upstream 31797 2732418 ~ 2736197 (+)
G165940 NA non-coding upstream 41004 2726764 ~ 2726990 (+)
G165906 NA non-coding upstream 225299 2542466 ~ 2542695 (+)
G165894 NA non-coding upstream 285586 2482138 ~ 2482408 (+)
G165889 NA non-coding upstream 319643 2448131 ~ 2448351 (+)
G165948 NA non-coding downstream 21334 2789852 ~ 2790079 (+)
G166738 NA non-coding downstream 119328 2887846 ~ 2890042 (+)
G166760 NA non-coding downstream 184126 2952644 ~ 2952881 (+)
G166763 NA non-coding downstream 187135 2955653 ~ 2955895 (+)
CI01000032_01698448_01701006 NA other upstream 1066706 1698448 ~ 1701288 (+)
G165570 NA other upstream 1410427 1349578 ~ 1357567 (+)
G166734 NA other downstream 66796 2835314 ~ 2849684 (+)
G166765 NA other downstream 188270 2956788 ~ 2957213 (+)

Expression


Co-expression Network