CI01000032_02522753_02527262 (FAM46D)


Basic Information

Item Value
gene id CI01000032_02522753_02527262
gene name FAM46D
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2522753 ~ 2527826 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_02522753_02527262.mRNA
ATGGCACAGACTCACTATTCATTCAAGCACCCAAGTGTAAGTTTTTACAATGCATACAATGTCAAAAAGCCAGCGGATCTAGTGAACCTGATAGAGATGGAAGATGACCGCCGGTTTCACAAACTGACACAAGAGCAGGTGGAGACTTTGGACCAAGTTCTTACAGAGGTCATTCCCATTCATGGCAGGGGCAATTTTCCAACCCTTGAAATTAAGCCTAAAGACATAATCCATGTGGTCAGAGACAGACTGATTTTGAAGAAAATCAAGGTGAGAGATGTCCGTCTCAATGGCTCTACAGCCAGTCATGTGCTGGTCAAAGAGAATGGCACCAGCTATAAAGACTTGGATATCATCTTTGGTGTGGAGCTTCCCAAACCAGAGGACTTCCAGATTATCAAAGAGGTGGTTTTGGGCTGTCTGCTGGACTTTCTACCTAAAGGAGTCAACAAAGATAAAATCACAGCTCTCACCATGAAAGAGGCATATGTACAAAAAATGGTCAAGGTGTTCACTGAGCATGACCGTTGGAGCCTTATCTCCCTCTCAAATAATAGCGGGAAGAACGTAGAGCTCAAGTTTGTCAGCTCTCTACGACGACAGTTTGAATTCAGTGTGGACTCCTTTCAGATTATCTTGGACAGCATGCTACAATCTTACTTGGATGCTGAAAGGAGGAAGGTTGTAGAAGGGCAAGAGGGCCAGGATTCTTCTTCAGCTCAAACAAAAGGGATTCAGTCAGCCCTAATGGATGAACCATTCCTCAGCTCTTGTGACACAGGACATCACCAGGAAAGTGACACTGACGTATGCTGCAAAACTGATGATATGCAGACTTTCTATGACTCTCAGTGTTATTGTAAAATCAGTCAGAAAGAACAGTCTAAATATTCAGAACAAGAACCAACTCTTGAAATAGACAAAGATGTTGAAACAGAAATGGTTGAAACTACAACTATGCCTGTACCTATGGAGCAAGTATCAGAACACCCTGTAACGTTGGATGTGGAGGAAAAGAATGAACCTCATGAAAATGTGTCTTTGCATACGGAGACGCTGTTAGAGGAAAATTCAAATGAAACAGGTATTGACTCAGGAGGGGGAAATGAACTGGTAGTGCTAAAAACCATGTCTGTTAAGCAAACAAATCCCCCAGTTAAAACATATATTAGTGAAATGGATTCTGACATGTTAGAAGACAAAGAGGCAGTTAATTCCAAACCATGGCTAGAAATGGTACATACTGACTTCTCTTGTCTTTCAACAAAAGGGACCTTTGGTGAGCGATGCACATTCCAACCTGCTCCCATTACATTTCTTACACAAGCAGCACTAGAATCATATGCTGAGTATCCTCTGCCACCCCCTGCCAAGAAAAACAGCCAAAATTCACAAATGGTTGTTCTCAAGCATTCCTCACCCAAACCTCCTCGTAAAATGTCCAAAAAGACAACTCCTGTGCCATGTTCACCAGAAAAATCTGTGTCAAATAATTTGGATGTTAATACTTGTCAGGTTTTGCATCCACCTAAAGCTTACCCAAACGATTCATTACCTATGCAGGTTAAATTGTCAGGTCTTACCACAAAAAGCTTTGAATTATCCAGTGCCTCAGAAAAAAACTCTAAAGAGTCAAAAGAACTAGACACTTGTACTGGAGCTTTTACTGTTGCTGCTCCAGAGAGTGGTATGCATTCAGAAGAGACACTGTACATGAGTCTGTTACCAGAGGAAAGCCTTCAAAGTCGAGTGCAAAGCTCAGAACCAGAAACTGGTGAAGCTACGCATGTCAATATTGTCATCCCTACATCCAATCCCAGTAATCTCCCCAAAGATCAAAACAGGATAAACCAGCCTTTTACCAGCGTTCAGACAGCACAGTGTCAGGCAATGGTACCTCTCATTAATGTGAATTCTGAGCCTTTACTTCAGGCAAATGACAATTATCACCTCAACTCAGCCTCTCCCAAAAAGGAAGACACTGAGACTTGTGCCCAAGTTGATGACCCCACATCACCAAAATATCTTACTCCACCCTCAGACACTAAGTCAGTCACTAAGGCAACAATTTCTGCTTCTCAAAAATTGAAACCACTGTCTGCAGACCATACTATTGATTCACAAGTGGTAGAGACCGATTCTTCGTGCTCTGAAAATGTTATATCACCTCAAATTCACAACTACCCCGCGTCCACTCTGCAGACTCAGGAACTTCTTGTGGCAAGTCCACAGACTAAAGAACCTCCAGAACTATTATCATGCGTATTAGAACCACTTGTCTCTTTACCAGAGGTTCAAAGCCTCACTGTATCAGCACCACATTTTTCAAAGTCACTAGAACCTTCCATATCCTCAACAGTAACAGAGACTCCTAGAATCTCAGAACCTCTTTTAGAACCATCAGTTATATCTCTGCATGTCATAGAGCCCTCTAAAGTATTCTTTGAAGTTCTAGAATCCTCTAATGTACTTTCACAGGTTTTGAAACCCTCAGCAGTATCAATGTCACATACATTAGAAACGTCTATGTCCTCAGTAAGTGAAGCGGTGCTGTCCAAGATATCAGATCCATCAGCTTCAGACATTAACAAGCCCATACTCCCTTCCAAAGAGCTGCCTTGTATTACAGTGATGGCTGAGAGCATGTATGGTGACTTTGAGCAGGCTATGGATCATCTACGTTACCGGCTAATAGCAACACGCAACCCTGAAGAGATCAGGGGTGGAGGCCTGCTCAAATACAGTAATCTTCTTGTCCGGGACTTTAAACCTGCCTGTGAAACTGAAATTAAGACACTTGAGCGCTACATGTGTTCACGTTTTTTTATTGACTTCCCTGATGTGAACGAGCAGCAGCGCAAGATTGAATCATATCTGCGCAACCATTTTATTGGAGAAGAGAAAAGCAAATATGATTACTTGATGACACTTCGGAGAGTTGTCAATGAGAGCACTGTGTGCTTGATGGGGCATGAGCGCCGTCAGACTCTCAATATGATTACCATTCTAGCTCTCAAAGTCCTGGGTGAGCAGAATATCATTCCTAATGCCAATAATGTTACCTGCTACTACCAGCCTGCACCATACATGACAGAACACAACTTCAGTAACTATTACATTTCAAATGGCCAGTCCCCACTTATATACCACCCCTACCCACTACACATACACATGCAGACTGGACTAGTTTAGGCTTAGGTACGTAACATAGTAAGACACACAGGGAAATCCTTGAGTCATGCAACCTAAAATTTCCACTACAAACGATCTACCCTTGAACTTGGGTCCCAACACTTAACTAAACAAAACTGTTTGAGTACCTAAGTGTTGGACAACGGAATGTCTCAATTAAGAACTGATGATGGTATTGACTATCAGTGAGAATTATACATAAAAACATTGGAGCCATTGCACTAGCAATATGAAGGTTAAAACATGTCACATGCATTTAATTGAAAATGACAATGACAAGATAAATGGTTTAAAAACAGGAAGACAGAAAAGACGGCAATATATAGTGACTATAAAAATTAGAAGAAAAAAAAACTTGACTGCTCTTCTCTTATCAGAGGTAGCTGAAAAGTCTTGTTTTAACACAGAAACAAACAAAAAACACTGTAAAAGACCAATGCGTTTGATAGAAAACTATTTTCAATAATTTAATGCTTTATTGGCATGACAAAAAGTGCAAGAGAAATAATCAGCATGCAGTCAATGATTTATTACATCGTAAAGTACTTTTGTTGTCTGAAACAA

Function

symbol description
fam46d terminal nucleotidyltransferase 5D

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_02522753_02527262.mRNA True 3756 mRNA 0.41 2 2522753 2527826

Neighbor

gene id symbol gene type direction distance location
CI01000032_02451472_02465595 TBX22 coding upstream 56375 2451472 ~ 2466378 (+)
CI01000032_02425512_02426806 NA coding upstream 95798 2425512 ~ 2426955 (+)
CI01000032_02408022_02408243 NA coding upstream 114461 2408022 ~ 2408292 (+)
CI01000032_02308962_02317494 MYOT coding upstream 205259 2308962 ~ 2317494 (+)
CI01000032_02232176_02233727 NA coding upstream 289023 2231644 ~ 2233730 (+)
CI01000032_02593980_02599978 ASB12B coding downstream 65180 2593006 ~ 2600530 (+)
CI01000032_02631785_02635555 NA coding downstream 102682 2630508 ~ 2635985 (+)
CI01000032_02660718_02684072 ARHGEF9 coding downstream 132892 2660718 ~ 2684218 (+)
CI01000032_02768103_02768518 NA coding downstream 240168 2767994 ~ 2768518 (+)
CI01000032_02773889_02774396 NA coding downstream 246063 2773889 ~ 2774501 (+)
G165894 NA non-coding upstream 40345 2482138 ~ 2482408 (+)
G165889 NA non-coding upstream 74402 2448131 ~ 2448351 (+)
G165880 NA non-coding upstream 77861 2392530 ~ 2444892 (+)
G165874 NA non-coding upstream 152591 2369838 ~ 2370162 (+)
G165906 NA non-coding downstream 14640 2542466 ~ 2542695 (+)
G165940 NA non-coding downstream 198938 2726764 ~ 2726990 (+)
G165847 NA non-coding downstream 204592 2732418 ~ 2736197 (+)
G165948 NA non-coding downstream 262026 2789852 ~ 2790079 (+)
CI01000032_02827399_02829641 NA non-coding downstream 299105 2827399 ~ 2829718 (+)
CI01000032_01698448_01701006 NA other upstream 821465 1698448 ~ 1701288 (+)
G165570 NA other upstream 1165186 1349578 ~ 1357567 (+)
G166734 NA other downstream 307488 2835314 ~ 2849684 (+)
G166765 NA other downstream 428962 2956788 ~ 2957213 (+)

Expression


Co-expression Network