CI01000032_02631785_02635555


Basic Information

Item Value
gene id CI01000032_02631785_02635555
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2630508 ~ 2635985 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_02631785_02635555.mRNA
CCATAAAAAGCTTCACATAATTTCTCATGTTTTACCATGTCAATTTTAAAAGTGAAAACCCTTGAACATGTTTTTCACTTTAAAATAATGGTCAAGATCACTAGTAGTCACTGCAGAGTAATGCCTTGGTTACTGTTGTAACCCTCATTCCCTGATGAAGGGAACAGAGTCATTATGTCAACTGACAAATGGGGTCTCACTTGGGAGCCCCATCACCTTTGAGTTATACAAAAACGGCCAATGGAATTGGCGAGTGGAATTTGCCTGCCAAGCCACTCCCCGTGGCAGGAGGGACATAACATCTCTGTTTCCTCCATCAGGGAACGAGGGTTACATCAGTAACCAAGATGTTCCCTATCTGTCAGTCACTACGACGTTTAGTTGACTGACAAATTGGCTCCCTATGGAAAGAGCCACAACCACTGAACTGTGTTAAGAGTGTTGGAGATGCAGATTCTGGCAATATGAGGCATGCCCCATGTAAGCCTAAAATGATAGTCCTCCATGCCAACGGGGTGGAAGGGGCAGGGCTTACCACTGAGATGGTTGTAGCTGGTGTTCTTTTTGTATGTTTACTTCATGGGAAGAGTGCTTCGGTTCTCTATTCCCATTGTTTTGTTTTGTTGTTTTTTTTTTCAGCCATGACCAGTGTTGTTAACACTGGGGAAGTGTACCTAGTCCAATGGAGAGGGACACTACGGAGGCCACATCCTACCCACAGGGAGGAGCATGTGGAAATACACATATGGACTGACCCATGGGGCAGTTCTACATATGGAAAGATCCTTGCAGTAGGTCCTGCCTAGACAGGGATGGAACTACTACAGTTGCAGAGACGGGGCAGAGCAGAATCTGCCCAGGAAAGACACAGGATTACAGATAGGGAAACTGTACCATGGGAAAATATGCACATGAGATTACCAAAGGGGAATCACAACATATGAGGCAGCTAGACCAGTACAAGGGCTGACCAACTAGGCATGCATCTCGAGTACTGGGCCTGGTGTCGGACGCCTCTGCCAGGTCTTACTGCTGAAGGATACTCAGAGATAACTCAATCCAGGTTACACAAAGTTTGGAACTCACCTGGAGAGCAAAGAAGGTGCTAGTATTAGGTGTCGTCCAGTCCGCAGCTCTGCAGATGTCTGCCAAAGAGGTACCGTCCACCAACGCCAAGGAGGAGACAACACTCTGAGTTGAGTGAGCCCTCACTCCAAGGGGGCATGGCACACCTTGGAATTGGTACGCCATGGCGATGGCATCCTCTATCCACAGCGATGCAAGGGCTGGGTCTGCCTCCTCCGGGAGCAGCACTTGCTGGCTGGGCACGTGGATCAGGTGTCAGAGAACAGCACGTCAAAGAGAGACTGTTAGACAAAGGGGAAGATTTAATGCTACCAAAAGCAATTGAAATCGCCCAGCAGTTTGAACTGTCACAGAAGCAAATTAAAATAGTCAGAGAAGAAGAATCTCAAGTTCAAGCAGTAAAGATGAATGCAAAATACCAAACTGCAAACAAGAAAACCTATCAGAAAAATCAGACAAAATGTGTGCAGAAAGAAATGCATGCAAACCACCAAAAAAACTGTTCAAGTTGTGGCAAAGACCCACAACATAAGTGGAATCAAGGAAAATGTCCAGAAAAGGGCTCTGTCTTCTCATACTGTCACAAACCAAACCACTGGGTGGCAGTATGCCACAAAAGATCAGTAAACACAAAGGTGCCTTTCAGAATTGATACTGGTGCGAAATATAACACATTGACTTTAAGCAATTATCAAGCACTTCTGCACAATGAACACCTGATAACATCAGATGGTCTGAAGGCAGACCCAGTGAAAATAGAGGCTGTCAAGTCCATGCCAACACCAACAGATAAGGATGGTGTTCGTCGTTTCCTAGGTTTCGTCACCTACCTGTCAAAATTCCTGCCAAACCTCAGTGAAGCTAATGCACCTCTAAGACAGCTCCTGAAAACTGATGTTGAATTTGCATGGCAACCAGCTCAACAGCCTTTGACAAACTCAAGGACCTATGCACGAAGTCCCCTGAGCTACAATTTTTTTATCTGTCCAAGCCTGTTGAGATCTTCTGCGATGCCAGCAGCAACGGCCTCTGTGCTGTCTTACTACAGGACAGTCATCCAGCTGCTTTCTCATCCAGGAAACCACTATGTTCTGCTAGTGGATTACTACTCAAAATTAATTGAAGTGGATAAGCTGAAAGACTTACATTGTCGTGCTGTCATAGAAAAGCTCAAGGCTCAATTCAGCAGACATCACATCCCCACCATCCTTCGAACAGACAATGGTCCACAATGTGCAGCGGATGAGTTTAAGGATTTCTGTCAAAGTTATGGAATCATTCATAAAACATCATCCCCACACACACCACACTCCAACGATCACATTGTTGTTGTTGACTGTGGAAGTAGACAGTACCGTCACAACATTCAGCATCTTCGCAAGAGCACAGCAGCTGCCAACGAGTCCCGTCACAGGCTTAACGATGATCAATGGACAGAGATATCAGAGCCAATAAGTGCCAAGCATCCAAAGTCTGTGGATCATCCTAGTTCATCCCAAGCATCACCTACAGAACTCGGGACTGCTAAGCAGACGTTGTCAACTGGGCAGTACACTACCAGATGAGGCAGAGTTGTGAAGCCTCCTGACAGGCTCTGCATGTAGTCAGGGAAAGGGATGGTAAAGACGCCTTGTGAAAGTGATGTGCTAGTAACCTCTCCTTCCTAGTTAGACATGTTGATGTTCAACAGTTCATTGTTGTGATAGATTGTGTCATTGACTAAGTTGCATAAAAGATGTGCTAACATTTCTTTATTATTATTTGGATATGCAAGTTGTATGCAAAATCCAGAGCTAAAGAAAAAACAACAATGTTTAATATTTGTAGTATCTGTATATGTATACAAAGTGATTATGTTAGCATGGTTTTTTGTTTCATGCTTAGGAGGGGAGATGTAATGTATTGTCATTTTGACAATGTTTCTTTAAGTGGTGCTCCGGCCTCTGTAGTCACTGCTATGACTCCTCCTACTTTGTATATGCACTGCAGTACCTA

Function

NR:

description
pol polyprotein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_02631785_02635555.mRNA True 3081 mRNA 0.45 6 2630508 2635985

Neighbor

gene id symbol gene type direction distance location
CI01000032_02593980_02599978 ASB12B coding upstream 29978 2593006 ~ 2600530 (+)
CI01000032_02522753_02527262 FAM46D coding upstream 102682 2522753 ~ 2527826 (+)
CI01000032_02451472_02465595 TBX22 coding upstream 164130 2451472 ~ 2466378 (+)
CI01000032_02425512_02426806 NA coding upstream 203553 2425512 ~ 2426955 (+)
CI01000032_02408022_02408243 NA coding upstream 222216 2408022 ~ 2408292 (+)
CI01000032_02660718_02684072 ARHGEF9 coding downstream 24733 2660718 ~ 2684218 (+)
CI01000032_02768103_02768518 NA coding downstream 132009 2767994 ~ 2768518 (+)
CI01000032_02773889_02774396 NA coding downstream 137904 2773889 ~ 2774501 (+)
CI01000032_02827399_02829641 NA coding downstream 191414 2827399 ~ 2829718 (+)
CI01000032_02857743_02864895 SYBL1, VAMP7 coding downstream 220928 2856913 ~ 2864975 (+)
G165906 NA non-coding upstream 87813 2542466 ~ 2542695 (+)
G165894 NA non-coding upstream 148100 2482138 ~ 2482408 (+)
G165889 NA non-coding upstream 182157 2448131 ~ 2448351 (+)
G165880 NA non-coding upstream 185616 2392530 ~ 2444892 (+)
G165940 NA non-coding downstream 90779 2726764 ~ 2726990 (+)
G165847 NA non-coding downstream 96433 2732418 ~ 2736197 (+)
G165948 NA non-coding downstream 153867 2789852 ~ 2790079 (+)
G166738 NA non-coding downstream 251861 2887846 ~ 2890042 (+)
CI01000032_01698448_01701006 NA other upstream 929220 1698448 ~ 1701288 (+)
G165570 NA other upstream 1272941 1349578 ~ 1357567 (+)
G166734 NA other downstream 199329 2835314 ~ 2849684 (+)
G166765 NA other downstream 320803 2956788 ~ 2957213 (+)

Expression


Co-expression Network