G165894


Basic Information

Item Value
gene id G165894
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2482138 ~ 2482408 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188451
AAAAAAAAAAAAAAAAAAAGAAGTCACTGAAATGAAGCCTCAAAAAAAAAAAAAAAAAAAAAAAATTCACAAGAGTTTTGGGAACTGTATATTTTAGTCTATAGTTTTTGCTTCAAAATTATGTGGAAATTATCCTGCCTACTTGGATGCATAAAACAATGTATTGATTTTAAATTTCTAATAACTTTTTGTTTACACAGGCCGTATGCGAAGAGGCGTGAATCTTCATGAATAATGCTGTGATTCACACCTGAGGAGATTTAGACCCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188451 True 271 lncRNA 0.30 1 2482138 2482408

Neighbor

gene id symbol gene type direction distance location
CI01000032_02451472_02465595 TBX22 coding upstream 15760 2451472 ~ 2466378 (+)
CI01000032_02425512_02426806 NA coding upstream 55183 2425512 ~ 2426955 (+)
CI01000032_02408022_02408243 NA coding upstream 73846 2408022 ~ 2408292 (+)
CI01000032_02308962_02317494 MYOT coding upstream 164644 2308962 ~ 2317494 (+)
CI01000032_02232176_02233727 NA coding upstream 248408 2231644 ~ 2233730 (+)
CI01000032_02522753_02527262 FAM46D coding downstream 40345 2522753 ~ 2527826 (+)
CI01000032_02593980_02599978 ASB12B coding downstream 110598 2593006 ~ 2600530 (+)
CI01000032_02631785_02635555 NA coding downstream 148100 2630508 ~ 2635985 (+)
CI01000032_02660718_02684072 ARHGEF9 coding downstream 178310 2660718 ~ 2684218 (+)
CI01000032_02768103_02768518 NA coding downstream 285586 2767994 ~ 2768518 (+)
G165889 NA non-coding upstream 33787 2448131 ~ 2448351 (+)
G165880 NA non-coding upstream 37246 2392530 ~ 2444892 (+)
G165874 NA non-coding upstream 111976 2369838 ~ 2370162 (+)
G165873 NA non-coding upstream 112983 2368927 ~ 2369155 (+)
G165906 NA non-coding downstream 60058 2542466 ~ 2542695 (+)
G165940 NA non-coding downstream 244356 2726764 ~ 2726990 (+)
G165847 NA non-coding downstream 250010 2732418 ~ 2736197 (+)
G165948 NA non-coding downstream 307444 2789852 ~ 2790079 (+)
CI01000032_02827399_02829641 NA non-coding downstream 344523 2827399 ~ 2829718 (+)
CI01000032_01698448_01701006 NA other upstream 780850 1698448 ~ 1701288 (+)
G165570 NA other upstream 1124571 1349578 ~ 1357567 (+)
CI01000032_02773889_02774396 NA other downstream 276324 2773889 ~ 2774501 (+)
G166734 NA other downstream 352906 2835314 ~ 2849684 (+)
G166765 NA other downstream 474380 2956788 ~ 2957213 (+)

Expression


Co-expression Network