CI01000032_02308962_02317494 (MYOT)


Basic Information

Item Value
gene id CI01000032_02308962_02317494
gene name MYOT
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2308962 ~ 2317494 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_02308962_02317494.mRNA
GCTTCCGGAGTCTGGCATCAAAAAGGTTAAGTCTCTTGCGGACACAGAGAGCAAACAGAGTTCTGCCAGTCAGGTGACTGAAGCTACGCAGCTCTCCTCAATGATCACACTTGATCCTCCACCGAAGGCGGTTAAAAACAGTGTTCCACATCCATTCCTTCCCACCAGCAACCTGAGTAAACCAGTGGAGCCCAGAGCCAGTGCCATGAATGTGGCTGACTTGCCCACCTTCTCGCCATCACTTTACCCCCCCAGCGCCTTTAATTATGAGCGTCCTCGTCATTTCATTCAGTCCTTGCCCAGTTTCCACACACCCGACAATGAGATCAGCAAGCCGAACAATCTTAGTTGCCCAGCTTCAACCGTTGCGCCTTTAGTGAGCCCTCCTCAGCCTACAGCCCCTCGCACATCAATGTGCTCCAGCATGACTTTGATTCCTAAAGCTCGGGCTGCTCCAAACACTCCCAGGCAAAATGCATTTCCATACCTCAATCGCCCTCTCCCAGGCGCTCCCCTAGGTCACACAGCCCATCGCCAAAGGCCCAAGAACAACCTGTGTCTCCTCCAATTCCCTGAAAACTCCTGTTCCGCCTCTACAGCCCCCACCTGTGTCTCAGATTACCTACACACCCAACACATGAAGACATTCAGGGTTCAAAAGATGCTCTTATTCAAGACCTTGAAAAGAAGCTACGAAACAAAGTTCCTCAACAAAGGAACAGTCAGGTCCAGAAAAAATCGTCCTGGAGGGGACAGTACTGAGGCTTCGACCATCCAAGAGAAGTGTTTTGCTCCTCGTTTTATACAAGTGCCGCAAGATCTAACGGTTGAAGAGGGACGATTCTGCAGGATTGATTTTAAGGTTGTAGGTTTGCCAACCCCAGATATTTCTTGGTATCTGGATGGGAAACCCATCCGACCTGATGACTACCATAAGATGCTAGTGTGTGAGAAAAGTGTCCACTCCTTCATTATTGAGATAGTTACCATTCATCACGCAGGTGTATATGAATGTGTAGCAAAGAACCGTGCTGGAGAGAGCCACTTCTCCCTGCGCTTGGATGTGATTGCTCAGGAACAGTTGTGTCCTCCCACATTTGTGGTGAAGATGAGGAACTCTCGAGCTCTGGAGGGAGACGCCATCAGGTTAGAGTGTAAGGTGACTGCGTCTCCAACCCCTCAGCTGTACTGGAAGAAAGACAAGGAAATGTTGCGGATTGACCCTATGAGAATGAGTCTTTCTCAGGACAATTCAGGAAAGCAGTGCCTGATCATCGATCCAGTGATTAAGTCTGACGCAGGCTGGTATACTGTTTCCGCCATTAATGAAGCAGGCATGTCTACATGCAATGCCAGGCTAGATGTGGCCA

Function

symbol description
myot Predicted to enable cell-cell adhesion mediator activity. Acts upstream of or within several processes, including heart contraction; myofibril assembly; and skeletal muscle tissue development. Predicted to be active in axon and plasma membrane. Is expressed in heart and skeletal muscle. Human ortholog(s) of this gene implicated in muscular dystrophy; myofibrillar myopathy 3; and spheroid body myopathy. Orthologous to human MYOT (myotilin).

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0007626 locomotory behavior biological_process

KEGG:

id description
K19875 MYOT; myotilin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_02308962_02317494.mRNA True 1370 mRNA 0.50 8 2308962 2317494

Neighbor

gene id symbol gene type direction distance location
CI01000032_02232176_02233727 NA coding upstream 75232 2231644 ~ 2233730 (+)
CI01000032_02201573_02204528 NA coding upstream 103357 2201471 ~ 2205605 (+)
CI01000032_02130148_02154109 KCTD12B, KCTD12 coding upstream 154853 2130148 ~ 2154109 (+)
CI01000032_02015472_02032776 FRMPD3 coding upstream 275313 2015472 ~ 2033649 (+)
CI01000032_01743751_01746492 NA coding upstream 562446 1743751 ~ 1746516 (+)
CI01000032_02408022_02408243 NA coding downstream 90528 2408022 ~ 2408292 (+)
CI01000032_02425512_02426806 NA coding downstream 108018 2425512 ~ 2426955 (+)
CI01000032_02451472_02465595 TBX22 coding downstream 133978 2451472 ~ 2466378 (+)
CI01000032_02522753_02527262 FAM46D coding downstream 205259 2522753 ~ 2527826 (+)
CI01000032_02593980_02599978 ASB12B coding downstream 275512 2593006 ~ 2600530 (+)
G165859 NA non-coding upstream 28432 2280032 ~ 2280530 (+)
G165807 NA non-coding upstream 34781 2268383 ~ 2274181 (+)
G165813 NA non-coding upstream 135808 2172938 ~ 2173154 (+)
G165797 NA non-coding upstream 152224 2156515 ~ 2156738 (+)
G165711 NA non-coding upstream 186459 2121671 ~ 2122503 (+)
G165873 NA non-coding downstream 51433 2368927 ~ 2369155 (+)
G165874 NA non-coding downstream 52344 2369838 ~ 2370162 (+)
G165880 NA non-coding downstream 75036 2392530 ~ 2444892 (+)
G165889 NA non-coding downstream 130637 2448131 ~ 2448351 (+)
CI01000032_01698448_01701006 NA other upstream 607674 1698448 ~ 1701288 (+)
G165570 NA other upstream 951395 1349578 ~ 1357567 (+)
CI01000032_02773889_02774396 NA other downstream 441238 2773889 ~ 2774501 (+)
G166734 NA other downstream 517820 2835314 ~ 2849684 (+)
G166765 NA other downstream 639294 2956788 ~ 2957213 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location