G165873


Basic Information

Item Value
gene id G165873
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2368927 ~ 2369155 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188429
ATGGCGGCAGCGGAAGCGCTGAGAAACCGGAAGCGCAAAGCGGGTGGCTCGAGAGCGGCGCTCCAGGGCAGGCAGTCTGCGAGGGTGCCGGCGCTGCAGGCGGTAGGCGAGTCTCGCATATTGTCGTTGCCTCTTCAACGGCGAGAAGCGAGCTGTTCCAGCAGGCGAGAGAGGGCGAAGGCGCTCAGTCTCGAAGTCCAGCGAAGAGAAGCGTCGTCGTCGCTGAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188429 True 229 lncRNA 0.65 1 2368927 2369155

Neighbor

gene id symbol gene type direction distance location
CI01000032_02308962_02317494 MYOT coding upstream 51433 2308962 ~ 2317494 (+)
CI01000032_02232176_02233727 NA coding upstream 135197 2231644 ~ 2233730 (+)
CI01000032_02201573_02204528 NA coding upstream 163322 2201471 ~ 2205605 (+)
CI01000032_02130148_02154109 KCTD12B, KCTD12 coding upstream 214818 2130148 ~ 2154109 (+)
CI01000032_02015472_02032776 FRMPD3 coding upstream 335278 2015472 ~ 2033649 (+)
CI01000032_02408022_02408243 NA coding downstream 38867 2408022 ~ 2408292 (+)
CI01000032_02425512_02426806 NA coding downstream 56357 2425512 ~ 2426955 (+)
CI01000032_02451472_02465595 TBX22 coding downstream 82317 2451472 ~ 2466378 (+)
CI01000032_02522753_02527262 FAM46D coding downstream 153598 2522753 ~ 2527826 (+)
CI01000032_02593980_02599978 ASB12B coding downstream 223851 2593006 ~ 2600530 (+)
G165804 NA non-coding upstream 27844 2184072 ~ 2341083 (+)
G165859 NA non-coding upstream 88397 2280032 ~ 2280530 (+)
G165807 NA non-coding upstream 94746 2268383 ~ 2274181 (+)
G165813 NA non-coding upstream 195773 2172938 ~ 2173154 (+)
G165797 NA non-coding upstream 212189 2156515 ~ 2156738 (+)
G165874 NA non-coding downstream 683 2369838 ~ 2370162 (+)
G165880 NA non-coding downstream 23375 2392530 ~ 2444892 (+)
G165889 NA non-coding downstream 78976 2448131 ~ 2448351 (+)
G165894 NA non-coding downstream 112983 2482138 ~ 2482408 (+)
CI01000032_01698448_01701006 NA other upstream 667639 1698448 ~ 1701288 (+)
G165570 NA other upstream 1011360 1349578 ~ 1357567 (+)
CI01000032_02773889_02774396 NA other downstream 389577 2773889 ~ 2774501 (+)
G166734 NA other downstream 466159 2835314 ~ 2849684 (+)
G166765 NA other downstream 587633 2956788 ~ 2957213 (+)

Expression


Co-expression Network