CI01000032_02201573_02204528


Basic Information

Item Value
gene id CI01000032_02201573_02204528
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2201471 ~ 2205605 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_02201573_02204528.mRNA
AAATAAAAGGAGGATATTGACCAGGAGACTCTCACAGCACCCGACGGGAGACCAAGGCTTGCGGCATCGGACAGGTAAGCCTTGTCGAATGGAGAAGAAAAGATGGAAAATGACTGGGAGGGCTCTCGCAGCATCCGACGGGAGATCAAGACTCCCAGCATCAGATGGGTAAGCCTCGCCGGAAGAAGGAGAAAAAATGGAAAATGGCCGGGAGGGCTCACTCAGCATCCGACGGGAGATCAAGACTCCCAGCATCGGATGGGTAAGCCTCGCCGGAAGGAGAAGGAGAAAAGATGGTCACTGACCGGGAGGGCTCTCGCAGCATCCGATAGGAGATCAAGACTCGTAGCATCAGACGGAAAACTGCGCTTCAAAACTGGGCTCCTATGGGAGCGGGGATATAATACTGCTGCGGCCCTGAAGGCAAGGTTAGCCAGAGATGGAGCTCCTGCAGGAGCGAAGGAGACAACACTGCTACTGCAGTGTAAGAAAAGAGTGGGCTCCTGCGGGAGCGGGTGGGAAGACACTGCTCAGCATCTAAGGGACATGGCTAGTGGTTTGCTAGCAGGAGCCTGTTACTTTATAGTAAACAAATTTCACTACCACTTAAAGAGACGAAGCGAAATTCAACCAGGGGCAGAAAAAGTAAAAGGATTTGAGCTGTGCTCTTACGGTTTTGAGCCAGCGGGGGTGGAGAGTGGGAGCTGGCCGAAAATGAATCTGCGTTTCGGCTTGCTGAGGGCCTGCTGCAGCGGCCTGACGCTGGAGGAAGGCCCATTCCTTTGCGGGAAGAGGGTGGCTTTGCCCAAGATGCAAGCTTGGTGTTCGAGAGGCTTTATTGTCCATTTCTTTATGGCCAGAAGGATTGAATGGGCCGGAGTTGAGAAAGACGGGGAAAGAGATAGCGAATGTTTTGCCTGTGGTGGCCAGGCCTTGGCGTGCTGGGACCGGTTTCTTTGGGCTGATGATGCCGAGGGATTGGCGGTGGAGCCAATTTCATCGGACGGCGAGAGCTCGATTTCGGACATGTTGGGAACGTAGGGCGGGACCTAATGCTGATAAACTGTCAAACAAACAGACTTGTGCTAATTGGTTTAATTATCTGAACTTGCTCCTCCCAAACTTTGTTAATAAAATATAATTTAATTAATTACCGCTATGTCCTAAACTTTAACTGGTCTGTAGGAAACTGACAGAGAGAGGGGAGGACAGTTGCTCGACATCACCAGAATGTATACAGGTGAGATTTGTCTGAAAAAAAGAGCACTGACTATTTTAAAGCAGTGTTTTCTATTTAGAATTTATTATATGAACATAAATGTACTTTGTACATTTTGAGGGTCACCTCACCTGACAGCTGTCTCCCCCTACTTTTAAAATGGCTGCTACACCCCTGCTACCACGATGTGCCCATAGAATACTTTCTGGAAAATGCATGGTGAAAATGCATCATGAATTTTTGTTCATGGTAAGTGCATAGATATCCAATTTAAATTTAAGCAATTCAAGTATACTGTAAATCTAAATTTCATTTTAAGCTCTTAAGGACCATGAACACTGTTGAAGCCATCAAGATCTCTACCAATCTAAACTGTCCCTTGGCAGCAGCTGAGTACAAGCTGGTATAATATTCCTCTGCTCATTGTGGTGTTGTGCTGGCATATGTAACACATGGGTTATCAGAATTTTTTAAAAGAGGATAGACATGTATGCTGGAGTGTAAATCCCTGGCAGGCCTGGAACCATCAGAGATGCTGGATTATCTCTGCAATCTTCTGGAGTGAGTGGCTACCCTCTTAAACACACACACACACAAATGACTGAGCCTAGGCTGTAATCCTCTGCTGCACACAAACACATACTTCCACACATATGGTGGTTTATTATACTTTATTATAGAAATTATTTAATGTAAATGCAGCAAGTCTAATTTAAATACTCTGAAATGTCATAACCCTGAGATGGACTGGTCATGCATCCAGACATTCAGGGTGTTTCCCTGCCTACATATTACAAGCGGTTTGGAAAATGAGTGAATAGATGGATAAAATATGGATAAGAGACACAGAGAGAGAGAGTTCACCAGCTATCAGTGTGGGAACACAGAAGAGTTTTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_02201573_02204528.mRNA True 2118 mRNA 0.46 4 2201471 2205605

Neighbor

gene id symbol gene type direction distance location
CI01000032_02130148_02154109 KCTD12B, KCTD12 coding upstream 47362 2130148 ~ 2154109 (+)
CI01000032_02015472_02032776 FRMPD3 coding upstream 167822 2015472 ~ 2033649 (+)
CI01000032_01743751_01746492 NA coding upstream 454955 1743751 ~ 1746516 (+)
CI01000032_01739954_01742737 NA coding upstream 458631 1739706 ~ 1742840 (+)
CI01000032_01698448_01701006 NA coding upstream 500422 1698448 ~ 1701288 (+)
CI01000032_02232176_02233727 NA coding downstream 26039 2231644 ~ 2233730 (+)
CI01000032_02308962_02317494 MYOT coding downstream 103357 2308962 ~ 2317494 (+)
CI01000032_02408022_02408243 NA coding downstream 202417 2408022 ~ 2408292 (+)
CI01000032_02425512_02426806 NA coding downstream 219907 2425512 ~ 2426955 (+)
CI01000032_02451472_02465595 TBX22 coding downstream 245867 2451472 ~ 2466378 (+)
G165813 NA non-coding upstream 28317 2172938 ~ 2173154 (+)
G165797 NA non-coding upstream 44733 2156515 ~ 2156738 (+)
G165711 NA non-coding upstream 78968 2121671 ~ 2122503 (+)
G165707 NA non-coding upstream 89263 2109321 ~ 2112208 (+)
G165773 NA non-coding upstream 104724 2096470 ~ 2096747 (+)
G165807 NA non-coding downstream 62778 2268383 ~ 2274181 (+)
G165859 NA non-coding downstream 74427 2280032 ~ 2280530 (+)
G165873 NA non-coding downstream 163322 2368927 ~ 2369155 (+)
G165874 NA non-coding downstream 164233 2369838 ~ 2370162 (+)
G165880 NA non-coding downstream 186925 2392530 ~ 2444892 (+)
G165570 NA other upstream 843904 1349578 ~ 1357567 (+)
CI01000032_02773889_02774396 NA other downstream 553127 2773889 ~ 2774501 (+)
G166734 NA other downstream 629709 2835314 ~ 2849684 (+)
G166765 NA other downstream 751183 2956788 ~ 2957213 (+)

Expression


Co-expression Network