CI01000032_02232176_02233727


Basic Information

Item Value
gene id CI01000032_02232176_02233727
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2231644 ~ 2233730 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_02232176_02233727.mRNA
GTATAAAAGGCGAAAAAACAAAGTAAAAGAAATGAACATTTAAAAGTATATAAATCAACTTTAAATGCAACTCTTAACCAAATAAAACAACCAAAATGAATTGAAGTGGAGACTTTAAATGCAAAAAAAAAATCATTCCTCCAAAATAATTTAAATTATATATGACTCCCTGTATTGTATTTGACCCCCTTCTTTTTCTATATGACCTTATGCCAATATTAACTAAATTTTAGCACTTTAGAGTTCAAACTTGTATATACAACTCAAATACATATACTCAAGTTCAACAAATATAAAGCAATAAACCCAACTATTAGTATGTATGTGGAATCACATATACAAATTTACACCGTAAACATTTATATACAAAATTGTATAAATGCGTATCAGTTCAGTATCAGTAACTCTTAGAATGCACAGTTTAATAATGTCAGTCCAAATAATAACAAATGATATTTTCTTTCCTCAGTTCCTTATGATGAATGATCCAGTGCTCAAGAAGTAATAAATACTCCAAACCTTCAAGAACCCAATGAAATATTTTGTTGTAGGCCATGCAATGCAGATGTCTACGACAAAAAGAAAAGACAAAAAGGTCTCTCGTCGTTTCATGGTTTGGTTTGCCATCTTCACACGATTCACATTTGAAGTGTTCGTATCAATGCAGCCCACGAATAGAAGGATCCAGAATCTAGATTCTGAGATAACAAAACTGGCTTGTTTTTACCAGATGCAACAATGGCCTACTCCATTAAATTTCAGCGTGACGACGGTCACAAGGATCAAAAGGATAAGGTTGGACTCCAGGATTCCCAGGTTGTGTCGCTTTGGAAGTATGAACTGTGAAAGACTCGCTTACAACTTCAGATTGGGGTCTTGAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_02232176_02233727.mRNA True 883 mRNA 0.33 4 2231644 2233730

Neighbor

gene id symbol gene type direction distance location
CI01000032_02201573_02204528 NA coding upstream 26039 2201471 ~ 2205605 (+)
CI01000032_02130148_02154109 KCTD12B, KCTD12 coding upstream 77535 2130148 ~ 2154109 (+)
CI01000032_02015472_02032776 FRMPD3 coding upstream 197995 2015472 ~ 2033649 (+)
CI01000032_01743751_01746492 NA coding upstream 485128 1743751 ~ 1746516 (+)
CI01000032_01739954_01742737 NA coding upstream 488804 1739706 ~ 1742840 (+)
CI01000032_02308962_02317494 MYOT coding downstream 75232 2308962 ~ 2317494 (+)
CI01000032_02408022_02408243 NA coding downstream 174292 2408022 ~ 2408292 (+)
CI01000032_02425512_02426806 NA coding downstream 191782 2425512 ~ 2426955 (+)
CI01000032_02451472_02465595 TBX22 coding downstream 217742 2451472 ~ 2466378 (+)
CI01000032_02522753_02527262 FAM46D coding downstream 289023 2522753 ~ 2527826 (+)
G165813 NA non-coding upstream 58490 2172938 ~ 2173154 (+)
G165797 NA non-coding upstream 74906 2156515 ~ 2156738 (+)
G165711 NA non-coding upstream 109141 2121671 ~ 2122503 (+)
G165707 NA non-coding upstream 119436 2109321 ~ 2112208 (+)
G165773 NA non-coding upstream 134897 2096470 ~ 2096747 (+)
G165807 NA non-coding downstream 34653 2268383 ~ 2274181 (+)
G165859 NA non-coding downstream 46302 2280032 ~ 2280530 (+)
G165873 NA non-coding downstream 135197 2368927 ~ 2369155 (+)
G165874 NA non-coding downstream 136108 2369838 ~ 2370162 (+)
G165880 NA non-coding downstream 158800 2392530 ~ 2444892 (+)
CI01000032_01698448_01701006 NA other upstream 530356 1698448 ~ 1701288 (+)
G165570 NA other upstream 874077 1349578 ~ 1357567 (+)
CI01000032_02773889_02774396 NA other downstream 525002 2773889 ~ 2774501 (+)
G166734 NA other downstream 601584 2835314 ~ 2849684 (+)
G166765 NA other downstream 723058 2956788 ~ 2957213 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G334886 NA non-coding CI01000115 null 2957735 ~ 2957944 (-)