G165711


Basic Information

Item Value
gene id G165711
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2121671 ~ 2122503 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188244
TCCTTCATCGTCACTCATTAAGCAGGGACTGAATTCAGTGTTTTGATTTGAATCAAACTTTTCTGGCATTACAAACCTGTATTTTGGGGCAATGTTTCATCTTCTCCTCCTGAGGAATGGTATTGGTCACGACTACAGCCTCAAAACAAGCATTGTTGATGCGTGAAATGGCCGGACCAGAGAAGATGCCATGGGTCAGGATGGCATATACTTTAACTGCACCAGCTGATATTAACTTATCGGCAGCATGGCAGACGGTACCGCAGGTGTCTGCCATATCATCGACCAATATGGCCACCCGGTCTGTCACATCTCCAACCAGAACCATACGGTCCACCTCATTTGCCTTTTTCCTTTCTTTGTGAATAAGGGCAAAGTCAACATTTAGCCTGTCTGCAATGGAGGTCACCCTGTCAATTGAAAAACAGCTCAGTCAGCAGTTACACATGCTAGGGCATAACTAAACAGGTGGTAAAATCAGACGGCCGACAGACCTCTTGGCTCCTCCAGCATCTGGTGATACAATAGTGCAGTTCTTCCATTCTGGGATATTTTCCTTAATCCATTTCAAAACG

Function

NR:

description
PREDICTED: FHA domain-containing protein FhaA-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188244 True 575 lncRNA 0.45 2 2121671 2122503

Neighbor

gene id symbol gene type direction distance location
CI01000032_02015472_02032776 FRMPD3 coding upstream 88022 2015472 ~ 2033649 (+)
CI01000032_01743751_01746492 NA coding upstream 375155 1743751 ~ 1746516 (+)
CI01000032_01739954_01742737 NA coding upstream 378831 1739706 ~ 1742840 (+)
CI01000032_01698448_01701006 NA coding upstream 420622 1698448 ~ 1701288 (+)
CI01000032_01660248_01663865 NA coding upstream 457298 1660248 ~ 1664373 (+)
CI01000032_02130148_02154109 KCTD12B, KCTD12 coding downstream 7645 2130148 ~ 2154109 (+)
CI01000032_02201573_02204528 NA coding downstream 78968 2201471 ~ 2205605 (+)
CI01000032_02232176_02233727 NA coding downstream 109141 2231644 ~ 2233730 (+)
CI01000032_02308962_02317494 MYOT coding downstream 186459 2308962 ~ 2317494 (+)
CI01000032_02408022_02408243 NA coding downstream 285519 2408022 ~ 2408292 (+)
G165707 NA non-coding upstream 9463 2109321 ~ 2112208 (+)
G165773 NA non-coding upstream 24924 2096470 ~ 2096747 (+)
G165766 NA non-coding upstream 32629 2088747 ~ 2089042 (+)
G165765 NA non-coding upstream 33545 2087913 ~ 2088126 (+)
G165763 NA non-coding upstream 35098 2086328 ~ 2086573 (+)
G165797 NA non-coding downstream 34012 2156515 ~ 2156738 (+)
G165813 NA non-coding downstream 50435 2172938 ~ 2173154 (+)
G165804 NA non-coding downstream 61569 2184072 ~ 2341083 (+)
G165807 NA non-coding downstream 145880 2268383 ~ 2274181 (+)
G165859 NA non-coding downstream 157529 2280032 ~ 2280530 (+)
G165570 NA other upstream 764104 1349578 ~ 1357567 (+)
CI01000032_02773889_02774396 NA other downstream 636229 2773889 ~ 2774501 (+)
G166734 NA other downstream 712811 2835314 ~ 2849684 (+)
G166765 NA other downstream 834285 2956788 ~ 2957213 (+)

Expression


Co-expression Network