CI01000032_01660248_01663865


Basic Information

Item Value
gene id CI01000032_01660248_01663865
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 1660248 ~ 1664373 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_01660248_01663865.mRNA
GCATTCATCTCATTCTGATTGGTGGAGTGTGTCAGCTTGTGGCAGGATTGCTGTCTTTCCGAAAATATGACCATCTGAGTGGAACGTCATTTGTAGGATATGCAGCACTGTGGGGGAGCTATGGGGCCACAAGAATTTTTCTAGGTGCCAACCAACAAAGTCCAAACATATTTAATCAATCAGCAATGATAAACGGCACATTTCAAGATCTGTACACAAACACTAGTGTCAATAAAACCGACATTCCAATGTACATCAAGGAGTCTGCCATAGCTGGGCTGGTACCCTACATCCTACTTTCCTTTCTTCTGGCCTTCTGTTCGGCAACAGTAAACTACATCATGCCCTTTGTGTTTGGAGCCATCACCCTCACACTAATATTTGAGGCTGTGGGTCTGGTAGCAGGGTGGGCTTTAGTGGTCTCTGGGGTTCTGGAGCTCCTAATCCTGCTCTTTGCCATATATGGCTCATCGGCCCTGCTAATCAAGGGATTGGCCCAACGCTACGTGCTAAAGGGTTTTGGAAACCCTCTCTTTAATGTGCTGCTCCTAGGAACCACCAATGCCAGCAGCTCCCAAAGCCTGGGCCAAGAGAAGAAGAAGAACACAAAATATGCTGAACCTATGGCCTTGGGATTCTTCTGCGACACAGTCTCACCATTTATATTCGCCTTCTATGCCTTTGGCTACTTCCCGTCCATCCCAGTAGCTGCCATCTGGATAAGCATAAATTCTGCTGCTCAGCTTTTATCTAGCTATTATGCATATCTGCGTCAAGACTGCTACCATGCAACCAAGTTTGGCCTGCACTGCGTGTTTTGGTTGGTGAAGACCTGGGAAGAGTATGTGGTGTCTGTAACCATTGGCCGGACTGAAGCTGGTGAAGTAAGGCACGCCATGGTTGGCAACTGGTTCTTCCTGTCTGCTGCTTTGGTTTTCTGCATCACAAGTCTAAACAAAGACACTCTTGAGCTAGTTCACAATTCATTTTTTGTCCTGGTGACCATATCAACCATCTCCCAGATTCCCATCGACAGGTACTACATCTTTTTTGGAGTGACCTGCTCCCTCTTCACTCTCTTGTCCTTCTATGGCACCTTTGCACGCCTCATCAACACCATTGCTGAGAAGTCCTTGATTCCAGTTGGACCCCAACCTGTCTCCACTGAATCCCTGCAGAAATATCTCAGTTACCTCAGGAGATCTAAACTGGATGAGCCTGAGGATAAAGGTTCACAGCTCCCAGATGCTTTATTCTATCTGTCCAATGGAGTGGCCGCACTCTCAGCCATTCACAACGGTCAGTCTGGACTGGCGTTTTTCGACCTGACTGTTCCCTGGGTACTCATCCCAGGAGCCATTATCCAGGCCTATGTCAGTCGACTACAAGTACAAGGTGGCCAGAGATTCGGCTCTGTCATTCCCTCATTCTACGTGGCTATTTGGGCAACTTGGAGCTGGTTTAGGTTTGCAGGACATCGCTTGCAAATATCCACAGAGTCAGCAAACGGATTTGCAGCTGGGGCAATAGCATTCTTGGTCATTAATGCCTTCTTGATTCTAATTGCAACCTATGGCAATCTAGTTCTTTTGGCATTGACCACTGTCATGGAGGTCATCATAGTTTGTTTTCTCCTCTCTACTTTTGGAAGACTGCCCTATCAGTTAGAAGTTGCTATGCTAGCAATTTTCGCCATCATATGTTTGTATGGCATGCTAGCATCCCTTGTGAACGGTATCTTCTCCAAGACTCTAATACCAGTTGGACCTTCCCTTATCAAGAACAAGAAAAAGAAGGAATCTGAGACCACATATCCATGTTTTATTGCTAAGTCTCGGGAAACCAGCGGACTGCTCAAGATTGCAAAATTGTTGGAAAACAATGGAGTGTGTGGCATCCCTACAGATACTGTCTATGCCTTGGCTGCTTCATGCAAGAACCCCAGTGCAATTGAGAAGATCTACTCTATCAAAGACCGTCCTGCGGAAAAGCCGATTTGTATCTGTATCTCAAGTGTTGAGCAGCTTGTGGCAGCCAAACCTCCCTTCAGTCCTCTGCTGTGGGAGTTCATGAGAAATGTCTACCCAGGAGGCATTAGTTGCATTGTCCCAAAGGGCGAATGGCTCCTTAAACTCGGTGTGGGTCCCGCATATGACCGTGTGGGGACCAGAGAAAGCATTATGATAAGAGTACCTGACCACACTGCTACTGCTCACCTGTGTGAATTCACCGGTCCATTGGCCATTACATCAGCCAATCCCAGTGGAGAAGCTGACAGTACCCATCATGATATGGTGATCAACCGTCTGGGCCACAAGATTGAAGGAGTCCTATGTGATGGAGAATCTAATGAGGTGGTGGCATCAACTGTAGTGAACTGCCTCAACATTGATGAAGGAACTATCAGCATTCTCCGTGAAGGCTGTGTACCTGCTTTGAAAGTGAGGCAGATTTTTGAACGAGTAAAAAGCAACATGTTATAGGATTACTACAAACGTCAGCTTCGACAGCACCTCTATTTGTTGTCTTTAAAGTGAAGGAAATTTAATTTTGCACATGAAGAGAAAACTTTGACAACTTTACATGTAAATAAGTCAATTTTGATCTCACCTGCTCAACTGCATTATCAGTTATTCTGAGCAAGTATCACCATGAAGTTTATATTTTATATAGCTAATGCTCACATATTAAGTGAGCATTAGCTTCAAAAATCTGTTACTGTATAGTGCTGTGTGAATTTACTGTGTGTTTGCCAATGCTTTTGAAGGTTGAAAAGTGTTGTAATACTGAACTGTTTTTTTTAAAATTTATTGCTATTTATGTATTCTTTCAATGTATCATGACTTTGTTGATTAAGAGTAAATATCAATGAGCAATTCAACCAGAGTTGAGTGAAAATGCCTTTAAAAATTATCTTTGCAATGTATGCTTGTATATTTATATAAACTGTATGTATGAGATTTTTTTTCAAATGTGCTTAATTGCTGTCTA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_01660248_01663865.mRNA True 2991 mRNA 0.44 9 1660248 1664373

Neighbor

gene id symbol gene type direction distance location
CI01000032_01634351_01638604 GLOD5 coding upstream 21579 1634351 ~ 1638669 (+)
CI01000032_01614652_01616848 NA coding upstream 43274 1614437 ~ 1616974 (+)
CI01000032_01602807_01606708 NA coding upstream 53336 1602464 ~ 1606912 (+)
CI01000032_01540330_01542854 NA coding upstream 117359 1533402 ~ 1542889 (+)
CI01000032_01469232_01488085 NA coding upstream 171823 1468891 ~ 1488425 (+)
CI01000032_01698448_01701006 NA coding downstream 34075 1698448 ~ 1701288 (+)
CI01000032_01739954_01742737 NA coding downstream 75333 1739706 ~ 1742840 (+)
CI01000032_01743751_01746492 NA coding downstream 79378 1743751 ~ 1746516 (+)
CI01000032_02015472_02032776 FRMPD3 coding downstream 351099 2015472 ~ 2033649 (+)
CI01000032_02130148_02154109 KCTD12B, KCTD12 coding downstream 465775 2130148 ~ 2154109 (+)
G165650 NA non-coding upstream 147610 1480285 ~ 1512638 (+)
G165635 NA non-coding upstream 255048 1404954 ~ 1405200 (+)
G165629 NA non-coding upstream 259364 1400663 ~ 1400884 (+)
G165626 NA non-coding upstream 264304 1395686 ~ 1395944 (+)
G165619 NA non-coding upstream 277126 1382872 ~ 1383122 (+)
G165684 NA non-coding downstream 57643 1722016 ~ 1727504 (+)
G165725 NA non-coding downstream 207646 1872019 ~ 1886396 (+)
G165762 NA non-coding downstream 421661 2086034 ~ 2086320 (+)
G165763 NA non-coding downstream 421955 2086328 ~ 2086573 (+)
G165765 NA non-coding downstream 423540 2087913 ~ 2088126 (+)
G165570 NA other upstream 302681 1349578 ~ 1357567 (+)
CI01000032_02773889_02774396 NA other downstream 1094359 2773889 ~ 2774501 (+)
G166734 NA other downstream 1170941 2835314 ~ 2849684 (+)
G166765 NA other downstream 1292415 2956788 ~ 2957213 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_007160 si:ch211-153b23.3 coding NC_007125.7 CM002898.2 11430796 ~ 11438060 (+)