G165684


Basic Information

Item Value
gene id G165684
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 1722016 ~ 1727504 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188212
TGTGAAAGTGGTCACTAGGAATTGTACTAAAGCTGATGCATGTGCTAAGTGACAATCAGTCTGTGAGTCAATGTTGCAGCTCAATATTTAATTGTAATTTCATTATTTCAAACTTAGTATTACCATAGTAGATGTCCAAAAATGTGAACTATAACAATATTTGCTGTTCTGTTTAGTGACAATAGTGATGATAAAATTACACACTTAGCCTTCAATGCACATCTGCCTCAAAAGTTTGTGAGAGTGTGTGTCTGCCCACGTACTTGTTCATGTTCTACTTTGAGCAGCAGTCTGCTGTTGAGTTGTTTGAGGGACGTGCTTTCCTCCTCGAGAGCTGCCACACGCTGCTGGAGGCCCACACTTGTGCTGTGGTAGATGTGATCCCACTCCTCGTTTAGTTTCATCAGCTGACACACACACACACACACACACACACACAGACACACGTTTTATGGGGACTTTCCATAAACATAATGATTTTTATACTGTACAAACTCTATATCCTACCCAATAAACTTAATCATCAAACACAAAACTTTCTGCATTTTTACATTGAAAAAAAAAAAAAACTTAAAATTATGTATAAGCGGTTCTTGTATTCTGGTATTGCCATCCTTGTGGGGACATTTTGTCCTCATAACTTAGGGTTTACTAGGACCGAATTGCAATTGTGAGTTTATATCACGCAATTCTGATTTTATAACTTATGAAATTGTGAGAAATTGTGTTTTATTTTTTATTCAGTGGCAGAAACGGGCTTCATATATGTTTGATGCATGTACCTAATTAAAGACATCTAATATAAAGTAGGACCACATTGGGTCGCCAAAAATGAAAGACACCTTACATATTGACATAAAAATTGGTTACAGACTGTAATGAATATTTTAGGAATACTATATATGGGACACTTACTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAGAAATTCCCAAAACCATTTGAAGCTTAGCAAAACGTAGTGTTATCCGTGTGAAAATAATGTCCTTTTATTTAATTATAATTTCAATTGGGTTTTTGGATATATGGGTCAATTTGGTTGCTTAATAACTTTCATGAATAATAATAACGATATAGAAAGTAGATATTTACATGGTCTAAACAACATGTGAGTGTCATAGATCTATATTGAGGACCCAAAAGCAGAAAGATACTGAATCTAAACGAGATGGTCCAGGACCACTCGGGCTTTGTCCTCAGCAGAAAGGAGTTTGAGAAGGAAAATGAAGAGAACTGCCTTGGAGAAATGGTCCACAATGGTGAAGATAATAGTATTGCCACTGGATGAAGGGAGACTGGTGAAAAAATCCAGGCTTGGATTTTTTCAGACAGCACATAAATACTGAAATGAGCTCTGTTTCACGTTGTAAGGCCCGCCCAATTGGCCCAACGATGGTTTCCAATAAAGCGGGTCAAGATTACATGAGCGTTCCTTTTATCTGACTCCATTTCATCATGACCTTGAATTTAGGTTAGAATGCCAACTGATTATTGACCACTGGTATAATAGTTTAACTACACATTTAATTATTCTATTTAAATTTTTATTCAAATTACACTTGTTCATTCGGATTCCTATAAAACTTCACAAACTCTTCAGTCTTGGTCATTAGATAGAGGCAATTGACTAATACCTTTAGATGCCACCATGCTTGCTTATTTCTAAAGGTATGCTATTTAGTCCCTTAGATCTTTACACACTTCATTAAAGTAAGACTATATCTAACCAGAGGTCATGACCATTACCATAGAAATAAGCTGACCGACTTAACTTCCTCAGATGGTAATTTTATATAATCACGCCATGGTTTGTACACTTAGCAAGAAAATTATTACAGTAATCAAAGGTTGAGGTTCATTCTATGTAGACTGGTCTTACAACACTCTGTTGTTCTAAATAGAAATTCCATTATTAGCCTCTACAGTCTAAGTACACATGAATAATGCCAATTTTTTTAGTCTGATCTCTAAAACTTTAGTTGGCATGCCCCAGTGCTCCACTGAATTTTAGTCTGTTACTAACCTGAGCATATATTTGTGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188212 True 2088 lncRNA 0.35 3 1722016 1727504

Neighbor

gene id symbol gene type direction distance location
CI01000032_01698448_01701006 NA coding upstream 20967 1698448 ~ 1701288 (+)
CI01000032_01660248_01663865 NA coding upstream 57643 1660248 ~ 1664373 (+)
CI01000032_01634351_01638604 GLOD5 coding upstream 83347 1634351 ~ 1638669 (+)
CI01000032_01614652_01616848 NA coding upstream 105042 1614437 ~ 1616974 (+)
CI01000032_01602807_01606708 NA coding upstream 115104 1602464 ~ 1606912 (+)
CI01000032_01739954_01742737 NA coding downstream 12202 1739706 ~ 1742840 (+)
CI01000032_01743751_01746492 NA coding downstream 16247 1743751 ~ 1746516 (+)
CI01000032_02015472_02032776 FRMPD3 coding downstream 287968 2015472 ~ 2033649 (+)
CI01000032_02130148_02154109 KCTD12B, KCTD12 coding downstream 402644 2130148 ~ 2154109 (+)
CI01000032_02201573_02204528 NA coding downstream 473967 2201471 ~ 2205605 (+)
G165650 NA non-coding upstream 209378 1480285 ~ 1512638 (+)
G165635 NA non-coding upstream 316816 1404954 ~ 1405200 (+)
G165629 NA non-coding upstream 321132 1400663 ~ 1400884 (+)
G165626 NA non-coding upstream 326072 1395686 ~ 1395944 (+)
G165619 NA non-coding upstream 338894 1382872 ~ 1383122 (+)
G165725 NA non-coding downstream 144515 1872019 ~ 1886396 (+)
G165762 NA non-coding downstream 358530 2086034 ~ 2086320 (+)
G165763 NA non-coding downstream 358824 2086328 ~ 2086573 (+)
G165765 NA non-coding downstream 360409 2087913 ~ 2088126 (+)
G165766 NA non-coding downstream 361243 2088747 ~ 2089042 (+)
G165570 NA other upstream 364449 1349578 ~ 1357567 (+)
CI01000032_02773889_02774396 NA other downstream 1031228 2773889 ~ 2774501 (+)
G166734 NA other downstream 1107810 2835314 ~ 2849684 (+)
G166765 NA other downstream 1229284 2956788 ~ 2957213 (+)

Expression


Co-expression Network