G165650


Basic Information

Item Value
gene id G165650
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 1480285 ~ 1512638 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188178
CACTGTTCTAATCACGTTTTCATAGACAGGTTTTCATAGACAGGTTTTCATAGACAGGTTTTCATGTCATATTTTTATTTTTAACATTTATTTTCCTAACAGTCTTCAGATATTTTCATTATCTCGATTAGGGCTGGGCGATATGGCTGAAAACTGTATCACGATATCAGTGTTTCATATCGGTCGATATCGATAATTATTGATATTTTTTCTGACCCGTTTAAAATAAGGACCAGGAGAAAAATATATTACATTTAAACATTTTTATTTTAAACTTAACCTTCCTCTGATCATAATCCCCTCAGTTATTAAGACAGAAATGTCAACAACCATGGAAAACTCAAATAATTAAAATGTTGTGCGGTGTTGCAGCTACAGATGTTGTTGGTTGAATACGGCTGTGCTCCAAAGGGTGAGCGCGGCTAAGGTGGTACATCAAGTTCGTGGTATTACCAGTCTTGGCGGGGACGACGGTCTTGCGTAATTTGCAGACGACATTGGTCTGACTACGGTCAGACTTATAATATCCAAAAAACTGCCATACTGGCGAGCTGACTTTTCCTCTTTTATTTACAATTTCCTCGCTCGCTGCGGCACTCATTTTCTGCTTATCAGTTGCCGGTTACTGAAGAGGAATCCAGCAGACCAGCACGAGACAACGATATGGCGCAACCATACTTGATACTGTTACATGATTGGCTGTTAGCGTGTTACTCCCTACGTTGCTAGGTTACCAGAGAGCGAGTGCCTTTGTTAATGCAACCAAACTTGCTTCGCAACCTCTGTTTTCTTCCGACGAAGAATAAAAAAATATCGAACGTTTTATCGAACACATTTTTTATTGATATCGATCACGTGTCTATCGCGATACATATCGTTATCGTTTTATCGCCCAGCCCTAATCTCGATTAACCGTTTTTGAAACCTATTGATGATTGAAATGAAAAATTGCCAAAAATGGCCATCCCTAATATAAACACACATTAACGGTGTACCGTAGTGATTCAGGATAAGACAAAAACACGGTTTGGAAAATGCATTCATGATTTACTCACTCAGTGTATTAATTTTTTTTTTTTTTTTTGTATATTTTGAACACAAAGTTACAGACTACAGCTTTAAATACTTATTACTTTTTACACTGGTCTACAGCAAAATGCTTCTGAGATAAATGTACTCACACTGTAAAAACACTATCTATGGAAGCACCATTAGGCCTAATAATTGAAATTATAAACTTTCAAACATAATTTGACAGCATGTTTTATTCACGCCAAATACGCATTGTGTAGTACGTAACTATAAAGTTTACACTGTTTTTCTCACAGTTCACCAGCCACTTTCACATTTTTGGGATGAAGTGGTGAATCTACATGTAAATATGATATATACTGCATCCCTGACTGTTTCAGCTTAAACAAACTAGATGGTGGAGTCCATAGCTTGTTAACTTATTGATAAAATAACATGATAAATATAATTATTTAAAAGTATTTAAAACGGTAACAAGTTTATATATATTTAGACTAAAATGGAAAGAAAAAAAATGCATCATACATTGTTCTTAGGACTGTGCATCCCATGACAAGCTTGACACGTCACCATGGAAATAAGAATGAAATGTGTTCTAACATAACTGTTGCATTAAACTCTTGCTGAGGGCTCAGTTAGAATATTTTAAACTTGCATAAGAAACCAGGCACAAAGGCGAGCCTGCAAGCACTCTTTGACCATTTGTGAATATTGGTCTGTCATCTTGCAATTTAATTTTGATATGGGCTGTAGTTTTGTAGTTCCTTATTTTAAGCGCTTGTTGGTGAAGTGCCCGCTATGCGTTGTTGTTGATGTGAAACTTTGGGGTAGCAATTAGATAATAAAAATAGCCTAATAATAGGGGTGTGATGATACACTTAGCTCATGAGACAGTACACAATATTGGGTTCACGAGAATAAGACAAGATATTTTTATGAAACACTATATTTAAAAAAACTTCAATGACAAAATATGACTGGTCTTTTGTTCGACTGAAAGTCACAAAATGCAAAACAATGCCAGGTGCATTTTACTTATTTAACTAATCTACGCTCTAAAAAAATCTGTAAAAATTGGGCACAATGTACTGTATTCATTAAGCAGTATTCATTTATTTTTTACAGGTGTTTTACCAGTGTTTTGAATTTTGCACTTCATTGAGTTGTGTTTTAGGGTTAATGGAAATGTCCGTAAAATTGCTGGATAATGTCCAGGTAATGAGCTGCCAGTACTTTTTCCGTTATTTTTACGGATTTATTTATTTTTTTTATTTTTTGTAGGGCTGTCACTAACTAACAATTTTTTTGGTAATCGAGTAATTGGTCAATTATTTTGACAAGTAATTGAGTAATTAGATAATATTTTTGTGGTAATAAAAATAGACCTAAGTGAATTCCCTTTCATGCCGAACACAGTCATGCTGATACCGCAAGACAAGTAATATTGTCACGTAGGGCTGGGCGATACAGCTAAAAAAAATTATCACGATATGTTTCATATTGATTGGTATCGATAATTATTGAAAAAATTTTAGCAGAAAAAAAATGTTTGAATCTAACCAATGCATTTTTAATTAAGGCAAACAACAAATAAATTTTAAAACGAAGCAAAATAAAATTTAAACAAATCTTTCTAATATTTTATATGAAGATTAAATAAATAAGTGTTAAAGAAACTTAGAGCTGCACAATTCTGTATAAATTTAGAAACTTTTTTGTTTTTCAAACCGAGATCACAATTCTGAATGAAAACTAAATGAAAAAATTTGTAATTTACTAGAGGTTCTGACAAAATATTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTTATTACTCACACTCATGCCGTTCCAGACCCGTAAGACCTTCGTTCATCTTCGAAACATAAATTAAGATATTTTTGATGAAATCCGAGTGCTCTCTGACTCCTCCATAGACGAGAATAATAAGAGATAAAAGAAGATAAGAGAAGATATTGTTGAATAAAGTCTTTATTTTAGTTTTGTTGCGCACAAAAAGTATTCTTGTCACTTCATAAAATTAAGATTGAGCCATTGTAGTCATGTGGACTTTTTTAACAATGTCTTTAGTACCTTTCTGGGCCTTGACAGTGGTGGTTAAATTGCTGTCTATGGAGGAGTTAGAGAGCTCTCGGATTTCATCAAAAATATCCTAAATTGTGTTCTGAAGATGAAAGACGGTCTTGCGGGTTTGGAACGACATGAGGGTGAGTAATTAATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAATGGGGTCAAATTCTACACCCTTTTTTTTTTTTTTTTTATAAACCTTTTTTTCAATGTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188178 True 3377 lncRNA 0.34 2 1480285 1512638

Neighbor

gene id symbol gene type direction distance location
CI01000032_01441770_01450965 ZDHHC15, ZDHHC15B coding upstream 28562 1441009 ~ 1451723 (+)
CI01000032_01293850_01336978 ATRX coding upstream 143117 1293850 ~ 1337168 (+)
CI01000032_01290025_01292308 NA coding upstream 187977 1289334 ~ 1292308 (+)
CI01000032_01279596_01288916 NUP62L coding upstream 191290 1279221 ~ 1288995 (+)
CI01000032_01251696_01259949 CNGA2, CNGA5 coding upstream 220037 1251347 ~ 1260248 (+)
CI01000032_01540330_01542854 NA coding downstream 20764 1533402 ~ 1542889 (+)
CI01000032_01602807_01606708 NA coding downstream 89826 1602464 ~ 1606912 (+)
CI01000032_01614652_01616848 NA coding downstream 101799 1614437 ~ 1616974 (+)
CI01000032_01634351_01638604 GLOD5 coding downstream 121713 1634351 ~ 1638669 (+)
CI01000032_01660248_01663865 NA coding downstream 147610 1660248 ~ 1664373 (+)
G165635 NA non-coding upstream 75085 1404954 ~ 1405200 (+)
G165629 NA non-coding upstream 79401 1400663 ~ 1400884 (+)
G165626 NA non-coding upstream 84341 1395686 ~ 1395944 (+)
G165619 NA non-coding upstream 97163 1382872 ~ 1383122 (+)
G165611 NA non-coding upstream 117970 1362053 ~ 1362315 (+)
G165684 NA non-coding downstream 209378 1722016 ~ 1727504 (+)
G165725 NA non-coding downstream 359381 1872019 ~ 1886396 (+)
G165762 NA non-coding downstream 573396 2086034 ~ 2086320 (+)
G165763 NA non-coding downstream 573690 2086328 ~ 2086573 (+)
G165765 NA non-coding downstream 575275 2087913 ~ 2088126 (+)
G165570 NA other upstream 122718 1349578 ~ 1357567 (+)
CI01000032_01698448_01701006 NA other downstream 185850 1698448 ~ 1701288 (+)
CI01000032_02773889_02774396 NA other downstream 1246094 2773889 ~ 2774501 (+)
G166734 NA other downstream 1322676 2835314 ~ 2849684 (+)
G166765 NA other downstream 1444150 2956788 ~ 2957213 (+)

Expression


Co-expression Network