G165626


Basic Information

Item Value
gene id G165626
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 1395686 ~ 1395944 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188152
GGCATGTCCTGTGAGCGGAGATAGAGTCACGAGTACGCGCAGCTTTTGTGTAGAGATCGTCTACAAGCTATCAATGGTCAGCTAAACAACTGTATTTAAACACACAATACACCATCGCATTATCCATGGATAACTTTTGAATCACTATAATGAATAAAGCGTATGAATGATGAATAATGAATTTATGAATTCACTACGTTTGTGTTGTTTACATTATATGCACTTAGGCGCCTATTGTCAACAAAAAAGACATTTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188152 True 259 lncRNA 0.37 1 1395686 1395944

Neighbor

gene id symbol gene type direction distance location
CI01000032_01293850_01336978 ATRX coding upstream 58518 1293850 ~ 1337168 (+)
CI01000032_01290025_01292308 NA coding upstream 103378 1289334 ~ 1292308 (+)
CI01000032_01279596_01288916 NUP62L coding upstream 106691 1279221 ~ 1288995 (+)
CI01000032_01251696_01259949 CNGA2, CNGA5 coding upstream 135438 1251347 ~ 1260248 (+)
CI01000032_01238397_01244212 NA coding upstream 151325 1237966 ~ 1244361 (+)
CI01000032_01441770_01450965 ZDHHC15, ZDHHC15B coding downstream 45065 1441009 ~ 1451723 (+)
CI01000032_01469232_01488085 NA coding downstream 72947 1468891 ~ 1488425 (+)
CI01000032_01540330_01542854 NA coding downstream 137458 1533402 ~ 1542889 (+)
CI01000032_01602807_01606708 NA coding downstream 206520 1602464 ~ 1606912 (+)
CI01000032_01614652_01616848 NA coding downstream 218493 1614437 ~ 1616974 (+)
G165619 NA non-coding upstream 12564 1382872 ~ 1383122 (+)
G165611 NA non-coding upstream 33371 1362053 ~ 1362315 (+)
G165610 NA non-coding upstream 36020 1359388 ~ 1359666 (+)
G165608 NA non-coding upstream 37107 1357943 ~ 1358579 (+)
G165587 NA non-coding upstream 133063 1262388 ~ 1262623 (+)
G165629 NA non-coding downstream 4719 1400663 ~ 1400884 (+)
G165635 NA non-coding downstream 9010 1404954 ~ 1405200 (+)
G165650 NA non-coding downstream 84341 1480285 ~ 1512638 (+)
G165684 NA non-coding downstream 326072 1722016 ~ 1727504 (+)
G165725 NA non-coding downstream 476075 1872019 ~ 1886396 (+)
G165570 NA other upstream 38119 1349578 ~ 1357567 (+)
CI01000032_01698448_01701006 NA other downstream 302544 1698448 ~ 1701288 (+)
CI01000032_02773889_02774396 NA other downstream 1362788 2773889 ~ 2774501 (+)
G166734 NA other downstream 1439370 2835314 ~ 2849684 (+)
G166765 NA other downstream 1560844 2956788 ~ 2957213 (+)

Expression


Co-expression Network