CI01000032_01238397_01244212


Basic Information

Item Value
gene id CI01000032_01238397_01244212
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 1237966 ~ 1244361 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_01238397_01244212.mRNA
TTATAAAAACATTCAATTTTATTGGTTTAAACAAAAAAAAAAAATAATAATAATAATAATAATAAAAACAGGTGATGTCCATTCCAATGGATGCAGGGTCTGAATGGGTTTGAGGACTGTTAGGTCTGTGTTTTATTTTAGAAATTACTATACTAACATTCTAGCTCTAAGATGTACATAGTGTCAAAAGTGGAAAGTGGAGGGATGGCGGGCCGGGCCAGGCCAGTGAGGTGGTGGAGGTGGGCCTGTAAACGAAGGTGTTGCCCATTTGAACCTATACAATCATTAGTGACCCAACTTGTATCCACAATAAGGGGCCCACATGGGTTTGCCCATGTGGGAACAACATGGTTGACCCAAGTAACCCCAGATAAAATACCCATTTTGGGACCATGTAGCCCAAGAATAACCCATGTGGGGCCAACATACACATGTTGGCTGGGAGGTCGGAGCTGGAGACGGTGGAGCCAGCAGGACTGGAGACCACCAAGGTGGAGCCAGTGGAGCAGGTGAGTTCTAGGTTGGCCTCCGTCACCGTAACAGAGCTGACAGGGGGCACAGAGAGTTCAGAGTCGGCCTCCTTAGCCATGGGTGGATGTCGCCGCCTCAGGGGGAAGTGTGTGCAGCCCAGACACACCAAATGGTGGTTGGCGTCACTGGGAGCACAGAGGACAGAGGAAAGACCTCATAGCGCCAAAACCACCGGGCATGAAAGCACCGAGACTGCCAGATTTATGCTGAACTCTGTGAATATATGTCACTCGGTTACATTAGGTAACCGGAGACGTTTTATCACTGTTGTAATTTTAACCACCGACTCTTTACATCCTCATTCTTTGGAAGTGTTTACAAAAAGAATTTGCTCAAGGACAGCCAACAAGAGGGATTCACCAAAAGACTGGAGAGGAGCACCTTTGAATCACACAACTGTGCTGGACATACAAACGGATCAGAGTTTAGAGGAAAAAGAGGATGGACAAAAAGACATTGAGATTGATGTTGCTCCACTGGGAGAAATGGAGTGAGATGTGAGGAGGCGGTGGAGAGGTGTGTGATGTCTGGAGAGCTGTATGGTAATGTGTCTCACGTCCCCCCTCTCTGCCTCCAGACACTCATCTGTCCTCTCAGCCTCATTTCAATCACAACACAGCACTTCATTTGAGATTTCTCTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_01238397_01244212.mRNA True 1174 mRNA 0.47 3 1237966 1244361

Neighbor

gene id symbol gene type direction distance location
CI01000032_01218926_01234833 PLS3 coding upstream 3037 1218926 ~ 1234929 (+)
CI01000032_01179180_01182878 MAGT1 coding upstream 53945 1178251 ~ 1184021 (+)
CI01000032_01000707_01061531 GRIA3B, GRIA3 coding upstream 176133 999178 ~ 1061833 (+)
CI01000032_00932336_00974922 GRIA3B, GRIA3 coding upstream 263044 932336 ~ 974922 (+)
CI01000032_00861012_00868904 FYN.L, FYNA, FYNB, FYN, FYN.S coding upstream 369062 860929 ~ 868904 (+)
CI01000032_01251696_01259949 CNGA2, CNGA5 coding downstream 6986 1251347 ~ 1260248 (+)
CI01000032_01279596_01288916 NUP62L coding downstream 34860 1279221 ~ 1288995 (+)
CI01000032_01290025_01292308 NA coding downstream 44973 1289334 ~ 1292308 (+)
CI01000032_01293850_01336978 ATRX coding downstream 49489 1293850 ~ 1337168 (+)
CI01000032_01441770_01450965 ZDHHC15, ZDHHC15B coding downstream 196648 1441009 ~ 1451723 (+)
G165564 NA non-coding upstream 35896 1201830 ~ 1202070 (+)
G165508 NA non-coding upstream 125074 1108413 ~ 1112892 (+)
G165505 NA non-coding upstream 135440 1099618 ~ 1102526 (+)
G165506 NA non-coding upstream 150713 1085924 ~ 1087253 (+)
G165580 NA non-coding downstream 16390 1260751 ~ 1261136 (+)
G165587 NA non-coding downstream 18027 1262388 ~ 1262623 (+)
G165608 NA non-coding downstream 113582 1357943 ~ 1358579 (+)
G165610 NA non-coding downstream 115027 1359388 ~ 1359666 (+)
G165611 NA non-coding downstream 117692 1362053 ~ 1362315 (+)
G165570 NA other downstream 105217 1349578 ~ 1357567 (+)
CI01000032_01698448_01701006 NA other downstream 454127 1698448 ~ 1701288 (+)
CI01000032_02773889_02774396 NA other downstream 1514371 2773889 ~ 2774501 (+)
G166734 NA other downstream 1590953 2835314 ~ 2849684 (+)
G166765 NA other downstream 1712427 2956788 ~ 2957213 (+)

Expression


Co-expression Network