CI01000032_01290025_01292308


Basic Information

Item Value
gene id CI01000032_01290025_01292308
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 1289334 ~ 1292308 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_01290025_01292308.mRNA
GTTTATAAGGGGGACGAAATGACCACCGACATTTGCAGGTATGTGCACTGCTGAGGATGCGACTCAATGCATGTGCTGGAGAACACAGGCTCTTATCTACATGCATGTAGTCTGTATGTAGCATGAACTACAAAGTGCAGTGTCTGCATTGTGATGCTTGTACAACAAACTGCATTTGCAAGGATGCTAGGCATATTGGGGTCATAACATGAAACAAAATACATGCCGTGATTTCTGCACATTTATTATAGCATGCGCCGGTAACAGAAAGCATGTGTCCGGAATGCATCATAGAACTCATGCCCTAGTTTCCCATTCTTTATATTTGCATTCTTTGCATTCTTCCATGCATTATATATGATCTTTCTGTGCATTTTAAAAATGTATTCAGTGACACGTATTCGTGTATTCAGAAAGAGGACGCGGACTGTCTTGAAGTGAATTGCGCTGGTGCATGTGTCTATTTGCGTTCAGTGTTCATAGAGCGCGCGCGCAGATGAGAGGAGTCTCGCGTGCGCCATTTTAGCGCGTCTCGAACCATCCGGCAAGATGGCGCTCTCGCTTTGTCTACCCTGAGCGGCGTAAAACACAATTTACTTTTACTGCACACATGAAAATTGACCGGATCGAATGAAAAAACAGCTTTCCTCACGGGGCCAAACCGGTGACGTCTCAAAGATCTGCGCGTGAAATGAGCACAGAGATCTTAAGGTCCAGTAAGCTGAATACATTGGTGACTAAACTTCATGAGTTCTTGGGTAATTCTCCGGACGACGAAAGCATTGATTCTCAAGACATTTCCAATGGTAAAATGGCAACCAGTGACTTAAACATCCCTGTTGAGAAAATGAATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_01290025_01292308.mRNA True 856 mRNA 0.44 3 1289334 1292308

Neighbor

gene id symbol gene type direction distance location
CI01000032_01279596_01288916 NUP62L coding upstream 339 1279221 ~ 1288995 (+)
CI01000032_01251696_01259949 CNGA2, CNGA5 coding upstream 29086 1251347 ~ 1260248 (+)
CI01000032_01238397_01244212 NA coding upstream 44973 1237966 ~ 1244361 (+)
CI01000032_01218926_01234833 PLS3 coding upstream 54405 1218926 ~ 1234929 (+)
CI01000032_01179180_01182878 MAGT1 coding upstream 105313 1178251 ~ 1184021 (+)
CI01000032_01293850_01336978 ATRX coding downstream 1542 1293850 ~ 1337168 (+)
CI01000032_01441770_01450965 ZDHHC15, ZDHHC15B coding downstream 148701 1441009 ~ 1451723 (+)
CI01000032_01469232_01488085 NA coding downstream 176583 1468891 ~ 1488425 (+)
CI01000032_01540330_01542854 NA coding downstream 241094 1533402 ~ 1542889 (+)
CI01000032_01602807_01606708 NA coding downstream 310156 1602464 ~ 1606912 (+)
G165587 NA non-coding upstream 26711 1262388 ~ 1262623 (+)
G165580 NA non-coding upstream 28198 1260751 ~ 1261136 (+)
G165564 NA non-coding upstream 87264 1201830 ~ 1202070 (+)
G165508 NA non-coding upstream 176442 1108413 ~ 1112892 (+)
G165505 NA non-coding upstream 186808 1099618 ~ 1102526 (+)
G165608 NA non-coding downstream 65635 1357943 ~ 1358579 (+)
G165610 NA non-coding downstream 67080 1359388 ~ 1359666 (+)
G165611 NA non-coding downstream 69745 1362053 ~ 1362315 (+)
G165619 NA non-coding downstream 90564 1382872 ~ 1383122 (+)
G165626 NA non-coding downstream 103378 1395686 ~ 1395944 (+)
G165570 NA other downstream 57270 1349578 ~ 1357567 (+)
CI01000032_01698448_01701006 NA other downstream 406180 1698448 ~ 1701288 (+)
CI01000032_02773889_02774396 NA other downstream 1466424 2773889 ~ 2774501 (+)
G166734 NA other downstream 1543006 2835314 ~ 2849684 (+)
G166765 NA other downstream 1664480 2956788 ~ 2957213 (+)

Expression


Co-expression Network