Gene
RNA
| Item | Value |
|---|---|
| gene id | G165505 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000032 |
| NCBI id | null |
| chromosome length | 4185905 |
| location | 1099618 ~ 1102526 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188006 | True | 602 | lncRNA | 0.49 | 2 | 1099618 | 1102526 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000032_01000707_01061531 | GRIA3B, GRIA3 | coding | upstream | 37785 | 999178 ~ 1061833 (+) |
| CI01000032_00932336_00974922 | GRIA3B, GRIA3 | coding | upstream | 124696 | 932336 ~ 974922 (+) |
| CI01000032_00861012_00868904 | FYN.L, FYNA, FYNB, FYN, FYN.S | coding | upstream | 230714 | 860929 ~ 868904 (+) |
| CI01000032_00846052_00850360 | COL10A1A | coding | upstream | 248761 | 846052 ~ 850857 (+) |
| CI01000032_00811247_00821148 | NA | coding | upstream | 278384 | 811247 ~ 821234 (+) |
| CI01000032_01179180_01182878 | MAGT1 | coding | downstream | 75725 | 1178251 ~ 1184021 (+) |
| CI01000032_01218926_01234833 | PLS3 | coding | downstream | 116400 | 1218926 ~ 1234929 (+) |
| CI01000032_01238397_01244212 | NA | coding | downstream | 135440 | 1237966 ~ 1244361 (+) |
| CI01000032_01251696_01259949 | CNGA2, CNGA5 | coding | downstream | 148821 | 1251347 ~ 1260248 (+) |
| CI01000032_01279596_01288916 | NUP62L | coding | downstream | 176695 | 1279221 ~ 1288995 (+) |
| G165506 | NA | non-coding | upstream | 12365 | 1085924 ~ 1087253 (+) |
| G165512 | NA | non-coding | upstream | 226129 | 873220 ~ 873489 (+) |
| G165316 | NA | non-coding | upstream | 364480 | 733588 ~ 735138 (+) |
| G165317 | NA | non-coding | upstream | 390216 | 704041 ~ 709402 (+) |
| G165508 | NA | non-coding | downstream | 5887 | 1108413 ~ 1112892 (+) |
| G165564 | NA | non-coding | downstream | 99304 | 1201830 ~ 1202070 (+) |
| G165580 | NA | non-coding | downstream | 158225 | 1260751 ~ 1261136 (+) |
| G165587 | NA | non-coding | downstream | 159862 | 1262388 ~ 1262623 (+) |
| G165608 | NA | non-coding | downstream | 255417 | 1357943 ~ 1358579 (+) |
| G165570 | NA | other | downstream | 247052 | 1349578 ~ 1357567 (+) |
| CI01000032_01698448_01701006 | NA | other | downstream | 595962 | 1698448 ~ 1701288 (+) |
| CI01000032_02773889_02774396 | NA | other | downstream | 1656206 | 2773889 ~ 2774501 (+) |
| G166734 | NA | other | downstream | 1732788 | 2835314 ~ 2849684 (+) |
| G166765 | NA | other | downstream | 1854262 | 2956788 ~ 2957213 (+) |
