G165629


Basic Information

Item Value
gene id G165629
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 1400663 ~ 1400884 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188155
GTGTAGTCTAATAATTAGTAACTGTCAATTTGAGGGGACAAGAAACATTAACAAAGCCGTTTTCATCATACTAGGTTAATAATGAATTTGCACATTTTTGTGAATGAATTTAATAAGCTTAGTTACCTTTCCTGGTAGCCTTCAGTAAACTAACTTAAGAAAATGATTTGTAAAACATATAAATATCAGTTGACCCTATGTTTACTTTCTTCACTGACACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188155 True 222 lncRNA 0.31 1 1400663 1400884

Neighbor

gene id symbol gene type direction distance location
CI01000032_01293850_01336978 ATRX coding upstream 63495 1293850 ~ 1337168 (+)
CI01000032_01290025_01292308 NA coding upstream 108355 1289334 ~ 1292308 (+)
CI01000032_01279596_01288916 NUP62L coding upstream 111668 1279221 ~ 1288995 (+)
CI01000032_01251696_01259949 CNGA2, CNGA5 coding upstream 140415 1251347 ~ 1260248 (+)
CI01000032_01238397_01244212 NA coding upstream 156302 1237966 ~ 1244361 (+)
CI01000032_01441770_01450965 ZDHHC15, ZDHHC15B coding downstream 40125 1441009 ~ 1451723 (+)
CI01000032_01469232_01488085 NA coding downstream 68007 1468891 ~ 1488425 (+)
CI01000032_01540330_01542854 NA coding downstream 132518 1533402 ~ 1542889 (+)
CI01000032_01602807_01606708 NA coding downstream 201580 1602464 ~ 1606912 (+)
CI01000032_01614652_01616848 NA coding downstream 213553 1614437 ~ 1616974 (+)
G165626 NA non-coding upstream 4719 1395686 ~ 1395944 (+)
G165619 NA non-coding upstream 17541 1382872 ~ 1383122 (+)
G165611 NA non-coding upstream 38348 1362053 ~ 1362315 (+)
G165610 NA non-coding upstream 40997 1359388 ~ 1359666 (+)
G165608 NA non-coding upstream 42084 1357943 ~ 1358579 (+)
G165635 NA non-coding downstream 4070 1404954 ~ 1405200 (+)
G165650 NA non-coding downstream 79401 1480285 ~ 1512638 (+)
G165684 NA non-coding downstream 321132 1722016 ~ 1727504 (+)
G165725 NA non-coding downstream 471135 1872019 ~ 1886396 (+)
G165762 NA non-coding downstream 685150 2086034 ~ 2086320 (+)
G165570 NA other upstream 43096 1349578 ~ 1357567 (+)
CI01000032_01698448_01701006 NA other downstream 297604 1698448 ~ 1701288 (+)
CI01000032_02773889_02774396 NA other downstream 1357848 2773889 ~ 2774501 (+)
G166734 NA other downstream 1434430 2835314 ~ 2849684 (+)
G166765 NA other downstream 1555904 2956788 ~ 2957213 (+)

Expression


Co-expression Network