G165725


Basic Information

Item Value
gene id G165725
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 1872019 ~ 1886396 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188258
GAGTAAAATATCTCTTAACTACTGCCCCTGACTACTGACCTGCCCCTCTTGAACTGTCTAACAGAGGGACGCAGGTTTTCCTCAAGAATTTGGATGTACTTGGCAGCATCCATTTTCCTTTCAATCCTGACCAATCGCCCAGTCCCTGCTGAAGAGAAACACCCCCACAGCATAATGCTGCCACCACCATGCTTCACAGCAGGTTTATTTTGTTTTGGGTGGTGTGCTGTGTTTGCTTTCCACCAAGCATAGCGTTTTAAGTTCAGTCCAAAAAGGTAAATTTTGGTCTCATCACACCATAGCAACCTTTTGCCAGATGGCATCAGAGTCTTACAGGTTTGTTTTTGCATAGCACAAATAAGACTGTGGCACTTTTTCAGGAAAGGCTTCTTTCTTGCCACCCTGCCATACAGGCCAGCTTTGTGTAAAGCTTGTGAGATGTCGCATGCACAGACCAACCAGTCCCAGCCATAAAGCCTTGTAAGTCCTTCAAAGTTGCCTTTAGCCTCTTAGTAGCTTTTCTGAACAATGTCCTCCTGGCTTAAATCTTTAAGAAACAGCTGGTTATCAAAACCACTACTATTGATGTCAGGTGGGGTAATTAGCCTGGTGTTTGATCTGGAAGCTGATTGGTTGCACATGAGCAAGTTTATAATGGTATACTCTAAGGCAGGGGTTCCCAAACACATTCCTGGAGCCTCCCCAACACTGCACATTTTGCATATCTCCTTTGTCTGACACACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188258 True 745 lncRNA 0.45 2 1872019 1886396

Neighbor

gene id symbol gene type direction distance location
CI01000032_01743751_01746492 NA coding upstream 125503 1743751 ~ 1746516 (+)
CI01000032_01739954_01742737 NA coding upstream 129179 1739706 ~ 1742840 (+)
CI01000032_01698448_01701006 NA coding upstream 170970 1698448 ~ 1701288 (+)
CI01000032_01660248_01663865 NA coding upstream 207646 1660248 ~ 1664373 (+)
CI01000032_01634351_01638604 GLOD5 coding upstream 233350 1634351 ~ 1638669 (+)
CI01000032_02015472_02032776 FRMPD3 coding downstream 129076 2015472 ~ 2033649 (+)
CI01000032_02130148_02154109 KCTD12B, KCTD12 coding downstream 243752 2130148 ~ 2154109 (+)
CI01000032_02201573_02204528 NA coding downstream 315075 2201471 ~ 2205605 (+)
CI01000032_02232176_02233727 NA coding downstream 345248 2231644 ~ 2233730 (+)
CI01000032_02308962_02317494 MYOT coding downstream 422566 2308962 ~ 2317494 (+)
G165684 NA non-coding upstream 144515 1722016 ~ 1727504 (+)
G165650 NA non-coding upstream 359381 1480285 ~ 1512638 (+)
G165635 NA non-coding upstream 466819 1404954 ~ 1405200 (+)
G165629 NA non-coding upstream 471135 1400663 ~ 1400884 (+)
G165626 NA non-coding upstream 476075 1395686 ~ 1395944 (+)
G165762 NA non-coding downstream 199638 2086034 ~ 2086320 (+)
G165763 NA non-coding downstream 199932 2086328 ~ 2086573 (+)
G165765 NA non-coding downstream 201517 2087913 ~ 2088126 (+)
G165766 NA non-coding downstream 202351 2088747 ~ 2089042 (+)
G165773 NA non-coding downstream 210074 2096470 ~ 2096747 (+)
G165570 NA other upstream 514452 1349578 ~ 1357567 (+)
CI01000032_02773889_02774396 NA other downstream 872336 2773889 ~ 2774501 (+)
G166734 NA other downstream 948918 2835314 ~ 2849684 (+)
G166765 NA other downstream 1070392 2956788 ~ 2957213 (+)

Expression


Co-expression Network