G165948


Basic Information

Item Value
gene id G165948
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2789852 ~ 2790079 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188509
TAGTGAGTGATTGTCGGTCAGGAAAATAATCTAAATTTTCTCATAACAATTCTTCACCAGATTTACTTTGCTGCACGCAAGTTTCCGCTGACTCAAAAACGTGCATACACGAGCTGAGACCTGACCTGAGATTTGATCGTAGCCACCGCTCACGCTCATATTGATAAATGCCAAATTTTGCGTGGAAACGAGCGTACGCACAGTTTTCTGGTGTATGATCGTTTGATA

Function

NR:

description
PREDICTED: von Willebrand factor A domain-containing protein 5A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188509 True 228 lncRNA 0.42 1 2789852 2790079

Neighbor

gene id symbol gene type direction distance location
CI01000032_02773889_02774396 NA coding upstream 15351 2773889 ~ 2774501 (+)
CI01000032_02768103_02768518 NA coding upstream 21334 2767994 ~ 2768518 (+)
CI01000032_02660718_02684072 ARHGEF9 coding upstream 105634 2660718 ~ 2684218 (+)
CI01000032_02631785_02635555 NA coding upstream 153867 2630508 ~ 2635985 (+)
CI01000032_02593980_02599978 ASB12B coding upstream 189322 2593006 ~ 2600530 (+)
CI01000032_02827399_02829641 NA coding downstream 37320 2827399 ~ 2829718 (+)
CI01000032_02857743_02864895 SYBL1, VAMP7 coding downstream 66834 2856913 ~ 2864975 (+)
CI01000032_03046961_03053202 RRAGA.L, RRAGB, RRAGA, MGC78980 coding downstream 256882 3046961 ~ 3053926 (+)
CI01000032_03083089_03083664 NA coding downstream 291904 3081983 ~ 3084146 (+)
CI01000032_03142737_03156736 NA coding downstream 351663 3141742 ~ 3158789 (+)
G165847 NA non-coding upstream 53655 2732418 ~ 2736197 (+)
G165940 NA non-coding upstream 62862 2726764 ~ 2726990 (+)
G165906 NA non-coding upstream 247157 2542466 ~ 2542695 (+)
G165894 NA non-coding upstream 307444 2482138 ~ 2482408 (+)
G165889 NA non-coding upstream 341501 2448131 ~ 2448351 (+)
G166738 NA non-coding downstream 97767 2887846 ~ 2890042 (+)
G166760 NA non-coding downstream 162565 2952644 ~ 2952881 (+)
G166763 NA non-coding downstream 165574 2955653 ~ 2955895 (+)
G166766 NA non-coding downstream 167338 2957417 ~ 2957680 (+)
CI01000032_01698448_01701006 NA other upstream 1088564 1698448 ~ 1701288 (+)
G165570 NA other upstream 1432285 1349578 ~ 1357567 (+)
G166734 NA other downstream 45235 2835314 ~ 2849684 (+)
G166765 NA other downstream 166709 2956788 ~ 2957213 (+)

Expression


Co-expression Network