G166766


Basic Information

Item Value
gene id G166766
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2957417 ~ 2957680 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU189459
CGAGGTTCGTGAGATCTTGGACTCCCGGCGCCGTGGTGGTCTACTTGAATATCTGGTGGACTGGGAAGGCTACGGTCCCGAGGAGCGCTCTTGGGTCCCCAGAAATGACATCCTCGATCCCAATCTTCTTCAAACATTCCACGCCAACCATCCCGACAGACCTGCCCCACGTGGAAGAGGACGACCACCACGACGCCGGGGTCCTCGGCCCTCAGGAGCGGGCCGTGGGAGGGGGGGTACTGTCACAGACACGCCAGGCTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189459 True 264 lncRNA 0.63 1 2957417 2957680

Neighbor

gene id symbol gene type direction distance location
CI01000032_02857743_02864895 SYBL1, VAMP7 coding upstream 92442 2856913 ~ 2864975 (+)
CI01000032_02827399_02829641 NA coding upstream 127699 2827399 ~ 2829718 (+)
CI01000032_02773889_02774396 NA coding upstream 182916 2773889 ~ 2774501 (+)
CI01000032_02768103_02768518 NA coding upstream 188899 2767994 ~ 2768518 (+)
CI01000032_02660718_02684072 ARHGEF9 coding upstream 273199 2660718 ~ 2684218 (+)
CI01000032_03046961_03053202 RRAGA.L, RRAGB, RRAGA, MGC78980 coding downstream 89281 3046961 ~ 3053926 (+)
CI01000032_03083089_03083664 NA coding downstream 124303 3081983 ~ 3084146 (+)
CI01000032_03142737_03156736 NA coding downstream 184062 3141742 ~ 3158789 (+)
CI01000032_03168377_03169554 NA coding downstream 210601 3168281 ~ 3169747 (+)
CI01000032_03210864_03212974 TMEM129 coding downstream 253184 3210864 ~ 3214164 (+)
G166763 NA non-coding upstream 1522 2955653 ~ 2955895 (+)
G166760 NA non-coding upstream 4536 2952644 ~ 2952881 (+)
G166738 NA non-coding upstream 67375 2887846 ~ 2890042 (+)
G165948 NA non-coding upstream 167338 2789852 ~ 2790079 (+)
G166767 NA non-coding downstream 124 2957804 ~ 2958119 (+)
G166770 NA non-coding downstream 2678 2960358 ~ 2960695 (+)
G166771 NA non-coding downstream 3527 2961207 ~ 2961459 (+)
G166773 NA non-coding downstream 4795 2962475 ~ 2962832 (+)
G166774 NA non-coding downstream 5610 2963290 ~ 2963603 (+)
G166765 NA other upstream 204 2956788 ~ 2957213 (+)
G166734 NA other upstream 107733 2835314 ~ 2849684 (+)
CI01000032_01698448_01701006 NA other upstream 1256129 1698448 ~ 1701288 (+)
G165570 NA other upstream 1599850 1349578 ~ 1357567 (+)

Expression


Co-expression Network