CI01000034_00361018_00362033 (MCHR1B)


Basic Information

Item Value
gene id CI01000034_00361018_00362033
gene name MCHR1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 360914 ~ 362033 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_00361018_00362033.mRNA
ACACTGACGAACAGTATCACAATGTTCTCATGCCTAGCGTTTATGGCGTCATCTGCTTCGTCGGCATTATAGGCAACTGCATTGTCATCTACACCATCGTCAAAAAGACAAAGTTCAGGGCGCAACAGACGGTGCCTGACATCTTCATCTTCAGTCTTTCAATTGCAGACCTTCTGTTTCTCCTAGGCATGCCGTTCCTCATTCACCAGCTGGTGGGAAACGGTTCCTGGTGTTTCGGTGCCACCATGTGCACCGTTATCACAGCGATGGACTCCAACAGCCAGATTGTGAGCACCTACATTTTAACAGTCATGACTTTGGATCGATACTTGGCAACAGTTCATCCCATCCGCTTCAACCACATTCGCACTCCATGCGTGGCCGTGGCGGTCGTCGGCCTGGTGTGGATCCTCTCGCTGCTGTCCATCACGCCGGTGTGGATGTACGCCGGCCTTATGCCCCTGCGAGACGGTTCAGTGGGATGCGCTCTGCTCCTCCCCAATCCGGCTACAGACACCTACTGGTTTACTCTCTACCAGTTCGTGCTGGCGTTCGCTTTGCCTTTGGTGATCATTTGCGTGGTGTTTTTCAAGATCCTCCAGAACATGGCAGCCACGGTCGCCCCACTTCCCCAGCACAGCCTTCGCGTGCGCACCAGAAAGGTCACTCGGATGGCAGTCGCCATATGCCTGGCATTCTTTATTTGTTGGGCACCTCATTACATCTTGCAACTGGCACATCTGAGCGTGCAGCGGCCCAGTTACGCCTTCCTCTACGCCTATAACATCGCCATCAGCATGGGCTACGCCAACAGTTGCATTAACCCGCTTCTCTACATCATGCTCAGTGAGACCTTCAAAAGACAATTCATCGTAGCCATCCGGCCAGTGCACAAAGACTTCCGGGCTGATCCGGGAACGGCCGAAGGGAGCGTCAGTCTACGTTTGGCCCCTGACGGAGCGCAGCAGTCCCAGTCCTCCCGGGAGCTGTTGCCGGTTACCGTGGCTGTACATTGAAACTATTATCTCACCAGGAAACCCTGGGAAACTGCACTGAGTCATGCTGAAGACATTTTTGTGTGTGTCTATAATGAGCATGCAGCTGAAAAGAAGTCTATAAA

Function

symbol description
mchr1b Predicted to enable G protein-coupled receptor activity and neuropeptide binding activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane. Is expressed in brain. Human ortholog(s) of this gene implicated in morbid obesity. Orthologous to human MCHR1 (melanin concentrating hormone receptor 1).

NR:

description
melanin-concentrating hormone receptor 1b, partial

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process

KEGG:

id description
K04320 MCHR1; melanin-concentrating hormone receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_00361018_00362033.mRNA True 1120 mRNA 0.53 1 360914 362033

Neighbor

gene id symbol gene type direction distance location
CI01000034_00101894_00115404 NA coding downstream 245510 101052 ~ 115404 (-)
CI01000034_00097095_00098729 MFSD6L coding downstream 261791 97026 ~ 99123 (-)
CI01000034_00071780_00082031 NA coding downstream 278883 71544 ~ 82031 (-)
CI01000034_00051315_00059354 TOM1 coding downstream 301560 50716 ~ 59354 (-)
CI01000034_00368808_00390623 NA coding upstream 6453 368486 ~ 391307 (-)
CI01000034_00558341_00561924 C1QTNF6A, C1QTNF6 coding upstream 196210 558243 ~ 561995 (-)
CI01000034_00571856_00577732 NA coding upstream 209823 571856 ~ 577775 (-)
CI01000034_00599073_00603301 UBE2I, GM14176, UBE2IA, GM5931, UBE2IB coding upstream 237040 599073 ~ 603301 (-)
CI01000034_00604811_00614185 MPST coding upstream 242733 604766 ~ 614674 (-)
G171324 NA non-coding downstream 9759 346849 ~ 351155 (-)
G171272 NA non-coding downstream 25136 290578 ~ 335778 (-)
G171177 NA non-coding downstream 173035 169652 ~ 187879 (-)
G171206 NA non-coding downstream 177549 183024 ~ 183365 (-)
G171136 NA non-coding downstream 316815 43738 ~ 44099 (-)
G171339 NA non-coding upstream 35681 397714 ~ 399839 (-)
G171340 NA non-coding upstream 50160 412193 ~ 412427 (-)
G171341 NA non-coding upstream 50639 412672 ~ 413037 (-)
G171309 NA non-coding upstream 79254 441287 ~ 442256 (-)
G171356 NA non-coding upstream 103379 465412 ~ 468708 (-)
G171229 NA other downstream 93668 229404 ~ 267246 (-)
CI01000034_01062505_01083413 NA other upstream 709580 1062444 ~ 1083413 (-)
CI01000034_01312431_01312780 PRR15LA other upstream 949496 1311529 ~ 1312780 (-)
G171755 NA other upstream 1502085 1864118 ~ 1866373 (-)
G171835 NA other upstream 2079788 2441821 ~ 2446293 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location