CI01000034_05356235_05375111


Basic Information

Item Value
gene id CI01000034_05356235_05375111
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 5355899 ~ 5375453 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_05356235_05375111.mRNA
AGTAAGTATTGATGGCTTTACACTTAGTAGACAGAGCAAAGCTGCTTAAGTGGCTATTCAAGAGAATCAATTCATGCCTGTCGTTTTTGTATTGTTATAGTTGAGTACGATACCTAAAGATACCGTAACAGATTTCCGCAGATATTCATATTTCTGCTTTGTAGGGTTTAAGATTACTTCAGAGTCAATATCAGTAAAGAGTATTGTGCCTTCCGCTGCATTCTCTTGAGACGAATAACCATTTTTCTACCCTAGTTTATTTCTGAATATAATTTCTTGCAGGTTAATTGGCCCCTCTACTGAGTTTTCTGGATAATTTTCCCCAGTGATCTGTAGTTCATAATGCTCACATTTGATTCAGCAGTCCCCAGACGTCCTCTCCTTGATCTCACGGACACTCACTTATCACTGAGACACATGAAGCAGAGCCCGATCTCTTCCCCCACTGGAAAATATGGCACTGTCAGAATGAAGCGTCCATTTAGTCCTGTTGAAGACGGATCGAACAGACTGACTGAACAGACTGGGCATGAGGGTGTGACCTCTGATGGGGTGGAGTTTACCAGACAGGACGCCCCATCTATAAACCCTCGTCCGAAGCGGGAGCGCAAACACAGGTCGTACACACTCTGTGAAGTGTGCAACATTCAGCTGAACTCCGCAGCACAAGCACAGATACACTACAATGGCAAAACACACCAGAAAAGACTCAAACACATAAACAACAGCAACACAGCAGTTTTTCTGTTTGACAGCCTGTCTTATCAGTCAGATTCGCTTGGACCTGTGCAGGTGTTGAGGAGGCAGATGGAGGAGGCTAGCATGGCCGGACACTGTAATAGACTCAACGCCACTGGAGGAGTAAATCACTTCCTCCTTCACCTGCCCATCACCTCGTGTAATACGCCCTACTGCACTCTGGGAAACTGTAGGCTTGAAGACTAATTGCTGAATTATTCAAATGATTCAGGAACAGTTTTGACTTTTGAGAACTTTTGACAAGTACTTAATGTTCTCTACATTTTGCTAATGCAATTGTGTGGCTACAGGTCCTGAGAGTTTTTTTTTTTTTTTTGTCTGGGGTTTTAATTTAAAGGCACAGTTCACCCTAAAATTAACATTTTGAACAATTATTTGATTTACCCTTATGTCGTTTCAAATCTCTATGCTATCTTTTTTCCCCTGTGGCACATAAAGACATTTTAAAGAATATTTCCATATTTCCAATGGAACGAAAAACACTTCTGAAGTCATGCATTCCGCTACAGCTCACAAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_05356235_05375111.mRNA True 1281 mRNA 0.42 4 5355899 5375453

Neighbor

gene id symbol gene type direction distance location
CI01000034_05302438_05326245 ZNF385C coding downstream 29654 5302288 ~ 5326245 (-)
CI01000034_05281481_05288563 NA coding downstream 67319 5281357 ~ 5288580 (-)
CI01000034_05269689_05276880 TTC25 coding downstream 78602 5268225 ~ 5277297 (-)
CI01000034_05236100_05264059 ACLY, ACLYA coding downstream 91353 5235132 ~ 5264546 (-)
CI01000034_05189944_05197158 NA coding downstream 158368 5189884 ~ 5197531 (-)
CI01000034_05419465_05426380 NA coding upstream 43207 5418660 ~ 5426380 (-)
CI01000034_05428767_05438942 KAT2A coding upstream 52076 5427529 ~ 5439213 (-)
CI01000034_05441613_05448148 RAB5C, RAB5B coding upstream 66085 5441538 ~ 5448148 (-)
CI01000034_05462429_05465076 NA coding upstream 86927 5462380 ~ 5465076 (-)
CI01000034_05467255_05480455 KCNH4, KCNH4A coding upstream 91802 5467255 ~ 5480455 (-)
G172680 NA non-coding downstream 138897 5211951 ~ 5217002 (-)
CI01000034_05176199_05177220 NA non-coding downstream 141847 5175614 ~ 5177220 (-)
G172719 NA non-coding downstream 194772 5160849 ~ 5161127 (-)
G172716 NA non-coding downstream 200214 5155486 ~ 5155685 (-)
G172714 NA non-coding downstream 203204 5152029 ~ 5152695 (-)
G172771 NA non-coding upstream 137075 5512528 ~ 5512796 (-)
G172696 NA non-coding upstream 153446 5528899 ~ 5535870 (-)
G172692 NA non-coding upstream 164432 5539885 ~ 5557975 (-)
G172776 NA non-coding upstream 201990 5577443 ~ 5577774 (-)
G172782 NA non-coding upstream 350928 5726381 ~ 5765635 (-)
G172593 NA other downstream 360956 4992960 ~ 4994943 (-)
CI01000034_04216451_04218876 NA other downstream 1138157 4216212 ~ 4221881 (-)
CI01000034_04165535_04172272 KCTD13 other downstream 1183729 4165373 ~ 4172272 (-)
G172151 NA other downstream 1958086 3391144 ~ 3451802 (-)
G172016 NA other downstream 2119284 3234963 ~ 3236615 (-)
G172800 NA other upstream 413579 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 422117 5795835 ~ 5811781 (-)

Expression


Co-expression Network