G170432


Basic Information

Item Value
gene id G170432
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 3847568 ~ 3847818 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU193619
AGAAAGTCCTAATGTCATCTTGTTATGAGTATAAAAGAAACCAGTCCACAGAATCTGTATCTTCCATTCCAACCTCTCCACCACCATGGGCAAGACCAGAGAGCTGTTAAAGGACATCAGGGACAAGATTGTAGACCTGCACAAGGCTGGAATGGGCTACAAGACCATCAGCAAGAAGCTTGTTGAAAGTGAGACAACTGTTTGTGCGATTATTCAGAAATGGAAGAAATACAAAATAACCATCAATCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193619 True 251 lncRNA 0.42 1 3847568 3847818

Neighbor

gene id symbol gene type direction distance location
CI01000034_03670122_03684523 NA coding upstream 162352 3669943 ~ 3685216 (+)
CI01000034_03656686_03659087 NA coding upstream 188396 3656686 ~ 3659172 (+)
CI01000034_03556390_03566045 NA coding upstream 281043 3554625 ~ 3566525 (+)
CI01000034_03533995_03552021 SPOP coding upstream 295463 3533995 ~ 3552105 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L coding upstream 409735 3432846 ~ 3438839 (+)
CI01000034_03855726_03858565 NA coding downstream 7733 3855551 ~ 3859311 (+)
CI01000034_03869116_03883535 SLC4A1A coding downstream 21298 3869116 ~ 3883690 (+)
CI01000034_03887718_03890074 NA coding downstream 39347 3887165 ~ 3890409 (+)
CI01000034_03890532_03897571 UBTF coding downstream 42620 3890438 ~ 3899195 (+)
CI01000034_03900854_03907256 ATXN7L3 coding downstream 53036 3900854 ~ 3908450 (+)
G170420 NA non-coding upstream 11214 3836097 ~ 3836354 (+)
G170342 NA non-coding upstream 157865 3609344 ~ 3689703 (+)
G170339 NA non-coding upstream 240645 3606701 ~ 3606923 (+)
G170336 NA non-coding upstream 244340 3603014 ~ 3603228 (+)
G170332 NA non-coding upstream 247352 3600004 ~ 3600216 (+)
G170435 NA non-coding downstream 2749 3850567 ~ 3850890 (+)
G170437 NA non-coding downstream 8114 3855932 ~ 3856175 (+)
G170211 NA non-coding downstream 12973 3860791 ~ 3865433 (+)
G170443 NA non-coding downstream 92522 3940340 ~ 3940807 (+)
G169806 NA other upstream 1509878 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 2116391 1729413 ~ 1731179 (+)
G169340 NA other upstream 2536690 1250219 ~ 1310878 (+)
G169394 NA other upstream 2654008 1150297 ~ 1193560 (+)
CI01000034_04125435_04125780 RPRML other downstream 277282 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 346820 4192311 ~ 4200636 (+)

Expression


Co-expression Network