CI01000036_00209267_00221982


Basic Information

Item Value
gene id CI01000036_00209267_00221982
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 208772 ~ 221982 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000036_00209267_00221982.mRNA
ACGTGCAGAAATTTCCTCTGAAGATTTGCTCTGAAGTCATAGTGAAGATGACTGACAGAATGTTTGAAGATAAACAACATGCCACCCTATATCAAAAATATCGATTTGATCCACCTGATGAGCTGAAGGAGCTTGTTCTCCAGTATCTGGACAAAAAGAAAGGAAAGCCCCATCAGCTGGCCGTGGATTTAGGCTGCGGAACAGGGCAGAACTCTCGTCTGCTGACAGCATACTTTCAGCAGGTTGTGGGCATTGATGTCAGTGAATCTCAGGTAAAGGAAGCGAGAGCAGTGCTGGGGTTCCCTAACCTCAGCTACAGAGTAGGCACAGCAGAGGAGCTGCCATTCCCAGATGGCTCGGTGGATCTGCTGACAGCTGCGTCTGCAGCTCATTGGTTTGACACTAAACGTTTCATAAAGGAGGCTGTACGTGTCCTGAAGCCTCATGGCTGCCTGGCTCTCTTTGGTTATGGAGGCAATGAGAAAATACACCATGAGTCCTGTGGTGATCGACTTAATAACATATATGAGGAAGTAATGCAAATTCTGCTGCCCTACACAAGCACTAGGGTAGCTGGGGCCAACAGTAAGCTAAAGGACTTATTTGAAGCCATACCCTTCCCAGATAAAGAGAGGATTGAAATAATTCCAGTAAAGCTGCAGCTAAGCATCAAGAACATAATTGGTTTTATTCAGACGTTCTCCATGTACCAAGCCTATCTGAGAGCCGATCCAAATGCCGCAACTGCGCTGTTGAAGAAAACAACATCACGGTGTTTAGTTAATCAAGTTGTTAACAAATCGAGGCTGTACAGCTGTCCAAAAATGGCTGTACGTTTGTTTGAGGATAAAGAACATGCAGCCTTATACAGGAAGTACCGAATTTCTCCTTCTGAAGAGCTCATCGGCAAGGTTCTACAATTCCACAAGAGTAATAAAGATTCATCCAATAACCTGGCAGTAGATGTTGGTTGTGGGTCAGGGCAGGGAACATTGCTCTTAGGACCACATTTTACTCATGTGGTGGGAACAGACATCAGTCCAGCTCAACTGGAGATGGCGAGGAAACATGTCAACGTTCCAAATGTTTCTTACCGGGAGAGTCCAGCTGAAGAACTGCCTTTTGAAGATGGCTCTGTAGATCTTGTGACGACCATGTCTGCATTCCACTGGTTTGACCATTCGCGTTTTCTTCAGGAGGCTCACAGAGTGCTTAAGCCTCATGGCTGCCTTGCACTTCTCAACTACACCATGGATATGGAGCTGAGCTATGGAGACTGCTCAGAGACTTTAAACCACATCTGTAATGAGGAGGTGTTTTCACCATACATAGAGAAGAAAACACAATTCTCAAATTCTGCCATGAGTCAACAAGTACAGAATATTAAAACTCCATCAACACCGCATGATCAGCAGATAGAAGAATCCTCTTGAAATTAACAGTTTTGCGAAATTAGACACTTTTTACATATTGTGTTACTCACCTCCACCCCCTTCTATCTGACATTGAAGTGTCCGAATACACAGTGACCCATAACACGCACCATTTTAATCCATTGTGAAATATTTTCATCCTGCCTGAGCTGATGGGGCTGAGCTGTTGAGAGGGGCTATGTTGAATCATCTGCCCCGTCGCACAAACAAGATCTGAGACCTGGGCTCACCTCTGCTGTAGCTCTCACGTGCTAAATCTGAGCCATATTTTTTCATGTCGGTGTGAAGAGACTAATTGCACTTTTTGCAACATTAAAATTGTAATGGACAGACCTAAACATATACAACACCATGATGAACATGTTTTTAAAAGGACAAACATACATTCATAATCAAAGAGGACTCGTAGTGTTTTGGAAGATAGAAAATGCTCTTAAACAAAGGCAATGGTTTGTGTGGCTGTGTTTGATTTACTGAATATGGCTTTTTAATAAA

Function

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000036_00209267_00221982.mRNA True 1928 mRNA 0.44 10 208772 221982

Neighbor

gene id symbol gene type direction distance location
CI01000036_00009193_00011238 RASM, MRAS coding downstream 197534 8445 ~ 11238 (-)
CI01000036_00478456_00483759 PRMT2 coding upstream 256215 478197 ~ 483759 (-)
CI01000036_00495699_00501488 UGT1A2, UGT1A1, UGT1AB coding upstream 273602 495584 ~ 501488 (-)
CI01000036_00501725_00508857 NA coding upstream 279743 501725 ~ 508857 (-)
CI01000036_00510617_00515905 UGT1A5 coding upstream 288466 510448 ~ 516005 (-)
CI01000036_00519221_00522105 NA coding upstream 297156 519138 ~ 522203 (-)
G173434 NA non-coding downstream 54296 152297 ~ 154476 (-)
G173433 NA non-coding downstream 92971 115496 ~ 115801 (-)
G173374 NA non-coding downstream 122349 79281 ~ 86423 (-)
G173400 NA non-coding downstream 146998 59093 ~ 61774 (-)
G173401 NA non-coding downstream 157956 47755 ~ 50816 (-)
G173496 NA non-coding upstream 55491 277473 ~ 277689 (-)
G173498 NA non-coding upstream 58719 280701 ~ 280908 (-)
G173594 NA non-coding upstream 107152 329134 ~ 329919 (-)
G173600 NA non-coding upstream 113798 335780 ~ 341739 (-)
G173511 NA non-coding upstream 176249 398231 ~ 400284 (-)
G173528 NA other upstream 737439 959421 ~ 960377 (-)
G174002 NA other upstream 1052796 1274778 ~ 1275195 (-)
G174386 NA other upstream 1642952 1864934 ~ 2010840 (-)
CI01000036_02022324_02026053 NA other upstream 1803926 2021947 ~ 2031983 (-)

Expression


Co-expression Network