CI01000036_00519221_00522105


Basic Information

Item Value
gene id CI01000036_00519221_00522105
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 519138 ~ 522203 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000036_00519221_00522105.mRNA
ATAAGTGCCTTGCAGAAATTCAAAACAACCAACTCTTGCCAGTACTACAGATCATATGCTTGTAATTATTACTGATTATGAATGCTATGATTGTTAGAATGGCTGCTTCTGTATTGCTCTTGTGTCTTTTCTGCCTGGCATCAGCAGAGGCTGGAAATTTATTGGTGATTCCAGCATTTGGCAGCCACTGGACAGGCATGAGGCCTTTGGTGGAAGAGCTTGGTCGTAGAGGAAACCAGGTGGTGGTCGTCATCCCAGAGCAAAGTCTGAACATGGGTCCAGCACAGCACACCACCACTCTGACATATCCAGTACCCTACACCAAGACCCAGTTACAGGAGAGTATGAATGCAGGTATTAATGGACTGTTGAGTGCAGATTTATCTACAGATGTGGCCAGGTTTCAGAATTTCATCAACACTATGGATATGCTTAAAGTTATGATAACCCGCAACGCTGAGGGTTTGCTCTCCAACAAGGATTTGATGAAGAAACTGCAAGACTACAACTTTGATGCTATTCTTACAGATCCATTTGAGACTGTTGGAGTTATTGCTGCTGAATATCTCTCAATTCCGTCCATTTATATACAAACAAGCCATCCTTGTGGTGTTGATGCTCTTGCCAGTCAATGTCCAATTCCAGCTTCTTATGTTCCACAACCTTTAACTCACTTTACTGACCACATGAATCTTTGGCAAAGAAGTGTGAACTTGGTAAGGACTCTGTTTCAGCCCATGGCTTGCGGACATATGTTTGCTCGTGCAGATGAGATCGCCTCACGTGTACTGCAGAGAAAAACTTCAGTGGTGGAGATCATGAGCCGTGCAGCTCTCTGGTTTATGCATTTTGACTTTGTCTTTGAATTACCACGCCCATTGATGCCTAACATGATCATAATTGGAGGAATGGACAGCAAGAAAGCAGGACCTTTGTCACAAACTTGTTGCGCTTTGTGTGTTCGTTTGGCCCGCTCCGGGAGTAAACGACAGGCGACTGCTGTGCGAGGATGCGCGATTTTCTCAGCTAACGTTACAGAAGAAGAGAGGGAAAGACGATTTATGATCAAGCCAGAGACCTAAGGAGTGCTTCATTCTTTTGTTTATGTGAGTTTGTTAGAAAATGAATGTTTCTGTTGTCTTCTGCCTGTTTAACGTAAATTAAA

Function

NR:

description
UDP glucuronosyltransferase 1 family a, b

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000036_00519221_00522105.mRNA True 1165 mRNA 0.44 3 519138 522203

Neighbor

gene id symbol gene type direction distance location
CI01000036_00510617_00515905 UGT1A5 coding downstream 3133 510448 ~ 516005 (-)
CI01000036_00501725_00508857 NA coding downstream 10281 501725 ~ 508857 (-)
CI01000036_00495699_00501488 UGT1A2, UGT1A1, UGT1AB coding downstream 17650 495584 ~ 501488 (-)
CI01000036_00478456_00483759 PRMT2 coding downstream 35379 478197 ~ 483759 (-)
CI01000036_00209267_00221982 NA coding downstream 297156 208772 ~ 221982 (-)
CI01000036_00529818_00535851 NA coding upstream 7294 529497 ~ 536037 (-)
CI01000036_00547746_00550751 NA coding upstream 25198 547401 ~ 550864 (-)
CI01000036_00553191_00555970 NA coding upstream 30731 552934 ~ 555970 (-)
CI01000036_00585386_00663579 THSD7B, THSD7BA coding upstream 63183 585386 ~ 663579 (-)
CI01000036_00666753_00752077 THSD7B, THSD7BA coding upstream 144519 666722 ~ 752077 (-)
G173550 NA non-coding downstream 23631 495181 ~ 495507 (-)
G173531 NA non-coding downstream 40983 475360 ~ 478155 (-)
G173536 NA non-coding downstream 44159 467719 ~ 474979 (-)
G173662 NA non-coding downstream 71678 447159 ~ 447460 (-)
G173552 NA non-coding downstream 71996 445490 ~ 447142 (-)
G173545 NA non-coding upstream 1504 523707 ~ 524014 (-)
G173681 NA non-coding upstream 53889 576092 ~ 576432 (-)
G173518 NA non-coding upstream 57901 580104 ~ 580960 (-)
G173553 NA non-coding upstream 84125 606328 ~ 643213 (-)
G173717 NA non-coding upstream 322899 845102 ~ 845346 (-)
G173528 NA other upstream 437218 959421 ~ 960377 (-)
G174002 NA other upstream 752575 1274778 ~ 1275195 (-)
G174386 NA other upstream 1342731 1864934 ~ 2010840 (-)
CI01000036_02022324_02026053 NA other upstream 1503705 2021947 ~ 2031983 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037659 ugt1a1 coding NC_007120.7 CM002893.2 9969987 ~ 10003782 (-)