G173552


Basic Information

Item Value
gene id G173552
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 445490 ~ 447142 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU197146
TTTTTTTTTTTGCAATTTGAATACGGAAGGCGGTCTGGCGGAAGCTAGATATGTTACTGCATAACTTGTTAAATATCAATATATATATATTTTTTTACACAAACACATCGATTCGCTTCAGACGGCCTTTATTAACTCCCCAGAGCTGTGTAGAATATGTTTATGATGGATGGATGTGGATGGATACACTTTCTTCAGCTTATACTTTTTGATCCTCGCTCACTGCCATTACAAAGCTCAGATGCATCAGGATATTTATTAATATTTCTCTGATTGTGTTCATCAGAAAGAACAAAGTCATATACACCTAGGATGGCTTGAGGGTGAGTAAATCTTGGGGTAATTTTCATTTGAAAGTGAACTAATCCTTTAATGGCTATGACCTAACAAAAGACTAAAATGAGCCTTTGATATGCCCCATCCAAACATCCTACTTGTCAATCAATTTAAATGGGTCTTTAAATTCAAATGTGTTTTCGCATCATTTAAATTTGCTTCATTAGGGGTGCTAGAGACTTAAGTAACTGAGTTTCTGACAACATTTGGCCAGTTAGATTGTATATTCTTTTCTCTGCCAGTGAAAATGGCTCCAAAAGAAGTGTCACCGAGCAGCACACAGACTATAAGACAGTAAAACACGATAGTTACAAAAGTGAAACCTCTATTGTGTTTGGGTTAAATATCAGCAATGCAGGGATGGCAAATTTGAGAGCCAAGGAGCTAACTGCTATAATTTGCAATTACACATACAGAATATCACAAAACATTAGGTAAACAAAGCACAAAGGCTTGTCTTCATCCAGACATCATAATTCAGCCAGATGCCGAGACTGGCCACTGTCCATCATTAAACCAGGTTTGTGAGCAGCTGGAAGGGACAGCAGCTCTCAATATGAGTCCACCGCACTGCTCTGGAGGTTAACAAGCACTGGCCCACTATAATAACACATCAGCCTGCAGCCACCCAAATCACCCACCCCACAATCCAAAGCATCTGACTTACTCAGACCTGATAAGACTGCAATATATGTCACATCCCATTCTCACCTGTGTCTTTAGAGACAGGACTTTCCACTTTCTTCAAAGCCCTGGAGGTCAAGGAGATTCACAAACTCTTCTGCTATTTATTTAGGTGTGTGGAAGAAAAGTACAGAAACCTTATTCTTTAGCTGAACCTAACTAATATGCACTAAAAATCGTAATGGCATATTCGAAAGCTTATTTTAAAAGGATAGTTCAACCAAAAATGCAAATTGTGTTATCGTTTAGTCACCCTCATGTTGTTCCAAACCTGTATGACTTTCTTCTGTGGAACATGAAGATATATTGAAAAAAATACAATCAAAGTCAATGTAGGTGGACCCAAATGTTTAGTTTGAAAAGATTGAAAAAATATTTGAGTAACTCTTAAAGCTGTAGTCCGTAGGTTTTGCCTCTTTGTCGCCTTCTCTGTTTGAATCCTGCAATTGCAGTTATTTGCGTAATTATCATCTTTATGTGGGTTGTGCATCGGCACGGCTCCTCAGCGTGGATGAATCTAATGTTTGCTGTCAGTCACCACATTGGTGTGGATACTGTACTTTGGAATCACAGATTGTAGTCTTGGAAGTATGACCAAAATAAGAATTTTCACTGGAAAATGTCATCTGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197146 True 1653 lncRNA 0.38 1 445490 447142

Neighbor

gene id symbol gene type direction distance location
CI01000036_00209267_00221982 NA coding downstream 223508 208772 ~ 221982 (-)
CI01000036_00009193_00011238 RASM, MRAS coding downstream 434252 8445 ~ 11238 (-)
CI01000036_00478456_00483759 PRMT2 coding upstream 31055 478197 ~ 483759 (-)
CI01000036_00495699_00501488 UGT1A2, UGT1A1, UGT1AB coding upstream 48442 495584 ~ 501488 (-)
CI01000036_00501725_00508857 NA coding upstream 54583 501725 ~ 508857 (-)
CI01000036_00510617_00515905 UGT1A5 coding upstream 63306 510448 ~ 516005 (-)
CI01000036_00519221_00522105 NA coding upstream 71996 519138 ~ 522203 (-)
G173661 NA non-coding downstream 5033 439850 ~ 440457 (-)
G173637 NA non-coding downstream 32881 412033 ~ 412609 (-)
G173511 NA non-coding downstream 45206 398231 ~ 400284 (-)
G173600 NA non-coding downstream 103751 335780 ~ 341739 (-)
G173594 NA non-coding downstream 115571 329134 ~ 329919 (-)
G173662 NA non-coding upstream 17 447159 ~ 447460 (-)
G173536 NA non-coding upstream 20577 467719 ~ 474979 (-)
G173531 NA non-coding upstream 28218 475360 ~ 478155 (-)
G173550 NA non-coding upstream 48039 495181 ~ 495507 (-)
G173545 NA non-coding upstream 76565 523707 ~ 524014 (-)
G173528 NA other upstream 512279 959421 ~ 960377 (-)
G174002 NA other upstream 827636 1274778 ~ 1275195 (-)
G174386 NA other upstream 1417792 1864934 ~ 2010840 (-)
CI01000036_02022324_02026053 NA other upstream 1578766 2021947 ~ 2031983 (-)

Expression


Co-expression Network