G173498



Basic Information


Item Value
gene id G173498
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 280701 ~ 280908 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU197090
CACAGACAAGGCTTAAACTTGTCCTAGACTGAAATGCATGTTTGAGCAATTTTAAATGAAAGCAACTTGCCCTGATATATCTTAAAGTATGTTAGTGCCATTGTTTTGTCTCAAGATGCACCAGTAATGCTTTTTTCTAGGGCACGTTTATAAAAGCTACTTAGATGCCCTAATTGAACTAAGGCCTAATCCTGACTTAGTCTAAGCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU197090 True 208 lncRNA 0.38 1 280701 280908

Neighbor


gene id symbol gene type direction distance location
CI01000036_00209267_00221982 NA coding downstream 58719 208772 ~ 221982 (-)
CI01000036_00009193_00011238 RASM, MRAS coding downstream 269463 8445 ~ 11238 (-)
CI01000036_00478456_00483759 PRMT2 coding upstream 197289 478197 ~ 483759 (-)
CI01000036_00495699_00501488 UGT1A2, UGT1A1, UGT1AB coding upstream 214676 495584 ~ 501488 (-)
CI01000036_00501725_00508857 NA coding upstream 220817 501725 ~ 508857 (-)
CI01000036_00510617_00515905 UGT1A5 coding upstream 229540 510448 ~ 516005 (-)
CI01000036_00519221_00522105 NA coding upstream 238230 519138 ~ 522203 (-)
G173496 NA non-coding downstream 3012 277473 ~ 277689 (-)
G173434 NA non-coding downstream 126225 152297 ~ 154476 (-)
G173433 NA non-coding downstream 164900 115496 ~ 115801 (-)
G173374 NA non-coding downstream 194278 79281 ~ 86423 (-)
G173400 NA non-coding downstream 218927 59093 ~ 61774 (-)
G173594 NA non-coding upstream 48226 329134 ~ 329919 (-)
G173600 NA non-coding upstream 54872 335780 ~ 341739 (-)
G173511 NA non-coding upstream 117323 398231 ~ 400284 (-)
G173637 NA non-coding upstream 131125 412033 ~ 412609 (-)
G173661 NA non-coding upstream 158942 439850 ~ 440457 (-)
G173528 NA other upstream 678513 959421 ~ 960377 (-)
G174002 NA other upstream 993870 1274778 ~ 1275195 (-)
G174386 NA other upstream 1584026 1864934 ~ 2010840 (-)
CI01000036_02022324_02026053 NA other upstream 1745000 2021947 ~ 2031983 (-)

Expression



Co-expression Network