CI01000036_00792090_00794146


Basic Information

Item Value
gene id CI01000036_00792090_00794146
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 791987 ~ 794708 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000036_00792090_00794146.mRNA
ACTGACCAAATGTGGTTATCAAACACAAAAACCATAGCACATGTAGATGTAACAGAATGGTGAAAAGCCTTCTTTTTGATGTTGATGTGGAATTCACTGCCTCAGCTAATACTGATAAATTAATTCCCATGTGCTTCTTTGAAGATATATTTGAGCACATGACTTTTCACCCCAATCTGATATGTAACCCACCCAAACTGGAAAAACTTTCAGCCTGCTAACAAAATGTGCTTTTATCCAATTCAGCTGGACCCCTGCATAGTGGTAACTAGGAGAGAACTGAATGACGAATTTGAACCCGTGCATATTTAAATGGGATGGTTTGTTACCAATTCATGGCAGTATAAATGAAAATCTGAATGAGAGTCCATGCCTCTGCCTGAAAGAGTTAACGTGTGTGCTTCTTGAGAAATTCTCGACTGAAGTGTCATGAATTCTGAAGCGCAGAAGCTTTCTCAGGTTCTTAAGACTGCATGCTGTGTTCCAGTCTGAGCCCACAAGCTTTGTTTGACCTAGTTATTCTAAAAAGCAGCGCAGGACTTTGACGCATTTGATTTCCAGGATGGCTGTGGCTGGTATGGCGGGTGACAGGCACATGCAGGAACGTGTGTCAGTATTCACATCCTCCCTACGGCTGACAGGTCACGGGGAAAAGGCCAAGTCCATCACGCAGAGGTTTTTCACTCTCAGTCTGAATGTTTGCTGGGCTATACGACTAAAAGTGGACTGGACGTCAATGGGCTGGACTATGATTCTAAAAGATGACTCTGGTGTAACGGGCTGGACATGGCGTGTTGGGAACTACCTGCTGCTCTCTATGTCTCTCATTGGAATGCAAGTGAGGTCAGACCTGGAATTTCCAAAGGACAGGCACTATACATGGAAAACGGGTAAGCGTGTTGTCTATGATGTCTACTCCTGTGATATGGAGATTTCTACGCTAGATCTCTTTTTAATGGCTTCGCTTTGATGTTTCTCCCTCCTGTTAGCATTACACAGCATCCATCCATCCATTCAGGATTTTATCTCACTCGAGCTCCGATAGAGTGTTTATCAGGAACTAGCATAATAAA

Function

NR:

description
PREDICTED: thrombospondin type-1 domain-containing protein 7B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000036_00792090_00794146.mRNA True 1073 mRNA 0.43 2 791987 794708

Neighbor

gene id symbol gene type direction distance location
CI01000036_00666753_00752077 THSD7B, THSD7BA coding downstream 39910 666722 ~ 752077 (-)
CI01000036_00585386_00663579 THSD7B, THSD7BA coding downstream 128408 585386 ~ 663579 (-)
CI01000036_00553191_00555970 NA coding downstream 236017 552934 ~ 555970 (-)
CI01000036_00547746_00550751 NA coding downstream 241123 547401 ~ 550864 (-)
CI01000036_00529818_00535851 NA coding downstream 255950 529497 ~ 536037 (-)
CI01000036_00988998_00991598 NA coding upstream 194290 988998 ~ 991733 (-)
CI01000036_01008391_01018664 NA coding upstream 213376 1008084 ~ 1019001 (-)
CI01000036_01250575_01252253 CHPF coding upstream 455088 1249796 ~ 1252643 (-)
CI01000036_01265331_01269187 NA coding upstream 470016 1264724 ~ 1269211 (-)
CI01000036_01396572_01398922 FEV coding upstream 601347 1396055 ~ 1398922 (-)
G173553 NA non-coding downstream 148774 606328 ~ 643213 (-)
G173518 NA non-coding downstream 211027 580104 ~ 580960 (-)
G173681 NA non-coding downstream 215555 576092 ~ 576432 (-)
G173545 NA non-coding downstream 267973 523707 ~ 524014 (-)
G173550 NA non-coding downstream 296480 495181 ~ 495507 (-)
G173717 NA non-coding upstream 50394 845102 ~ 845346 (-)
G173720 NA non-coding upstream 62099 856807 ~ 857074 (-)
G173555 NA non-coding upstream 128047 922755 ~ 929366 (-)
G173768 NA non-coding upstream 151463 946171 ~ 946672 (-)
G173528 NA other upstream 164713 959421 ~ 960377 (-)
G174002 NA other upstream 480070 1274778 ~ 1275195 (-)
G174386 NA other upstream 1070226 1864934 ~ 2010840 (-)
CI01000036_02022324_02026053 NA other upstream 1231200 2021947 ~ 2031983 (-)

Expression


Co-expression Network