G179968


Basic Information

Item Value
gene id G179968
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 3534626 ~ 3535176 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU204338
GAAACCTCAGACAAAATGAGAGAACAAGGGGTGTACCTGATCTACAACAATGTTTAGGTGGGTGGCACGTGTCCAATTTATGCCACATGAATGGCCGGACCCAGGGTTTCCCAGCAGAACATTGCCCAGAGCATCACACTCCCTCCACCGGCTTGTCATCGTCCAACAGTGCATCCTGGTGCCATCACTTCCCCAGGTAAATGGCACACACGTACATGGCCATCAACGGGACTTATCAGACCAGGCGACCTTCTTCCATTGCTCCAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204338 True 269 lncRNA 0.52 2 3534626 3535176

Neighbor

gene id symbol gene type direction distance location
CI01000039_03454189_03458136 NA coding upstream 76486 3454040 ~ 3458140 (+)
CI01000039_03359162_03369982 NA coding upstream 164223 3358895 ~ 3370403 (+)
CI01000039_03352914_03354134 GAS1A coding upstream 180150 3351530 ~ 3354476 (+)
CI01000039_03181221_03188468 FBP2 coding upstream 345391 3180393 ~ 3189235 (+)
CI01000039_03170952_03179241 FBP1.S, F16P1, FBP1B, FBP1, FBP2, FBP1A coding upstream 355353 3169850 ~ 3179273 (+)
CI01000039_03596770_03597721 NA coding downstream 60821 3595997 ~ 3597726 (+)
CI01000039_03651436_03658228 NA coding downstream 116260 3651436 ~ 3658264 (+)
CI01000039_03659569_03662364 NA coding downstream 124393 3659569 ~ 3662652 (+)
CI01000039_03665710_03683733 NA coding downstream 130071 3665247 ~ 3683850 (+)
CI01000039_03684191_03691901 MCCC2, MCCC2.S coding downstream 149015 3684191 ~ 3691932 (+)
G179966 NA non-coding upstream 5107 3525088 ~ 3529519 (+)
G179963 NA non-coding upstream 16209 3517188 ~ 3518417 (+)
G179959 NA non-coding upstream 46261 3488048 ~ 3488365 (+)
G179951 NA non-coding upstream 73230 3460590 ~ 3461396 (+)
G179899 NA non-coding upstream 120450 3411792 ~ 3414176 (+)
G180008 NA non-coding downstream 59451 3594627 ~ 3595520 (+)
G180018 NA non-coding downstream 92020 3627196 ~ 3627505 (+)
G180026 NA non-coding downstream 168219 3703395 ~ 3703604 (+)
G180028 NA non-coding downstream 171723 3706899 ~ 3707151 (+)
G180029 NA non-coding downstream 172248 3707424 ~ 3707992 (+)
G179903 NA other upstream 109071 3424037 ~ 3425555 (+)
G179798 NA other upstream 402442 3129572 ~ 3132184 (+)
G179528 NA other upstream 1036007 2497674 ~ 2498619 (+)
G178423 NA other upstream 2548874 966676 ~ 982406 (+)
CI01000039_04048342_04049635 NA other downstream 513117 4048079 ~ 4049972 (+)
G180149 NA other downstream 539700 4079419 ~ 4079563 (+)
G180156 NA other downstream 555822 4090998 ~ 4091608 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other downstream 688403 4223868 ~ 4224657 (+)
CI01000039_04829464_04847182 ZFR other downstream 1309006 4829413 ~ 4848563 (+)

Expression


Co-expression Network