CI01000039_03596770_03597721


Basic Information

Item Value
gene id CI01000039_03596770_03597721
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 3595997 ~ 3597726 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_03596770_03597721.mRNA
GTATAAAGAAAGTCTTTTTCCATTTTAACTCATCGATCATGCAAATATCGCCTCCACACTGTGATATCTTCCACTTAGTGCATAGTCTATCTAACTGGAATGATAGAACTAAGCTGCTTAAAACATAGTAAAATGTGAATAAGTTTATAAGGCATATTAATTCTCAAGGGTATTTTTGCACGCCAGAGGTAAATTGTGAATGTCATTAATTTTACCATAAAATGTTAAGTCAGGTAACCTAAAAATGCGATTCATGTGGGAACATCAAATTAAAGTGGTTTTAGTAACACTGAATATATTTTAAAACACTTTTATATATCTAAAACAACAAGACAATATTACACCAAGGAAAATCATTTTTAAAGATCAGATCAGGGCTGCATTTCACAAAAGCATTGTAAACCTAAGTTGGGCTTACAATGCTTTTGGGAAACACAGCCCAGATCAGGTAGAAAATGTTTCTTTAAATAACAACAGCTTATTTTCACTTTTTTTTTTTTCAATGTGTAAAAGAAGCAAAGCGACATTGTCAAATCAGTAATTATTTCGCACTGCTTTCAAAAAAAAATGTTCTCTTTTTGAGGATAAACAAACCACAAGCAAGTAGAGCTCACACTGAGAGCAGGGATGAATCAAGTCAAGTTAAGAGTTTCAAACTAGGTCAGAGAGCACACACGGATTTAGCAAAACTAGAAGAAACAGTAGGGGGAACTGTGGGACCTGGATGAAAGTCCACGTGCCATCCCTGGTCAGGCAGTGCGAATGCTCCTGTTATGCAGAGAAGCCAGAATAGCTACTTTACATCATTTCCACCCTGGCACGAGCTTGTCTCGTATTCCAGGCATGCACCAGCGTTTTCCCTGAGAGACAATGACCTTGCCAACACATGTCGAATAGCAGCCCTTGTCCTTTGGCAAAATCTTGTTTCCATTTCCCCAGAAACACTCGCTACACTTGGGGAAGATACAGCGTTGTCCCCCTGCAGCCTTCTGATTGGACAACCCGAGGCCACCACCTGGCTCTCCGTACAAGAAACTCTGCCGGCACATCCTGGCAGTGAGCAAAAACTCACTTTGTTTTTGTTCAGCAACTACTCTATTTTTGGTTCTGACTTCAAACTTCAAAGATCATCTATAAATGAGGATAAAACTGCATCCTTATCTCATTTTGAGCCAGATGCTTCACTAAAATGCAACTTCATCTTGCCAATTAAAATCAAAGGTTAATCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_03596770_03597721.mRNA True 1231 mRNA 0.39 2 3595997 3597726

Neighbor

gene id symbol gene type direction distance location
CI01000039_03454189_03458136 NA coding upstream 137857 3454040 ~ 3458140 (+)
CI01000039_03359162_03369982 NA coding upstream 225594 3358895 ~ 3370403 (+)
CI01000039_03352914_03354134 GAS1A coding upstream 241521 3351530 ~ 3354476 (+)
CI01000039_03181221_03188468 FBP2 coding upstream 406762 3180393 ~ 3189235 (+)
CI01000039_03170952_03179241 FBP1.S, F16P1, FBP1B, FBP1, FBP2, FBP1A coding upstream 416724 3169850 ~ 3179273 (+)
CI01000039_03651436_03658228 NA coding downstream 53710 3651436 ~ 3658264 (+)
CI01000039_03659569_03662364 NA coding downstream 61843 3659569 ~ 3662652 (+)
CI01000039_03665710_03683733 NA coding downstream 67521 3665247 ~ 3683850 (+)
CI01000039_03684191_03691901 MCCC2, MCCC2.S coding downstream 86465 3684191 ~ 3691932 (+)
CI01000039_03694332_03696941 NA coding downstream 96606 3694332 ~ 3697070 (+)
G180008 NA non-coding upstream 477 3594627 ~ 3595520 (+)
G179961 NA non-coding upstream 54876 3509407 ~ 3541121 (+)
G179968 NA non-coding upstream 60821 3534626 ~ 3535176 (+)
G179966 NA non-coding upstream 66478 3525088 ~ 3529519 (+)
G179963 NA non-coding upstream 77580 3517188 ~ 3518417 (+)
G180018 NA non-coding downstream 29470 3627196 ~ 3627505 (+)
G180026 NA non-coding downstream 105669 3703395 ~ 3703604 (+)
G180028 NA non-coding downstream 109173 3706899 ~ 3707151 (+)
G180029 NA non-coding downstream 109698 3707424 ~ 3707992 (+)
G180031 NA non-coding downstream 111848 3709574 ~ 3709961 (+)
G179903 NA other upstream 170442 3424037 ~ 3425555 (+)
G179798 NA other upstream 463813 3129572 ~ 3132184 (+)
G179528 NA other upstream 1097378 2497674 ~ 2498619 (+)
G178423 NA other upstream 2610245 966676 ~ 982406 (+)
CI01000039_04048342_04049635 NA other downstream 450567 4048079 ~ 4049972 (+)
G180149 NA other downstream 477150 4079419 ~ 4079563 (+)
G180156 NA other downstream 493272 4090998 ~ 4091608 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other downstream 625853 4223868 ~ 4224657 (+)
CI01000039_04829464_04847182 ZFR other downstream 1246456 4829413 ~ 4848563 (+)

Expression


Co-expression Network