G183433


Basic Information

Item Value
gene id G183433
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 171309 ~ 173835 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU208307
TGTGTTTGATTTCAACCTCTCACTAGACACCGTCTGTCCAATGAGATCATACTGTAGTAGACTGGAACTCTCTTGAGGAACTTCCACTGAAAATAATGGTCCTTTCTTCCATGTGTAAACAATCTCACTCATTGGGTAGGCATCTATATTAGGCACAAATCAAAACTAAAGTCAGTCATACCAGTAAATCCATTTAAAGGGAATATGTGCCATTTTGACATACGTACAGCTGCCAAATTTCAAAGGGCATGAATGTCCATCCATTGGAAAATTTATCAATCGCATGGGGCACTCTGCATTGATGGTTAACCTGAAAACAATAAAAGTGTTACCTTTAATTTATGTGAAATAACAGATGATTTTGTTAAATTCTATACACAGTGGGGTTCAGTCTGAGTTTATAGGAAAATCCTTTGTATACAATATTGTATACAACACACTTATTTCTTTTATCATCATAAACAAATAAGAATACATTGTTTTACAGTTTTATTTTAAACAATTAACCAGTAGGACTGGTAAGAGAAATTGTTAAGTTTCTACTGCAATTTTAAAGAGCAAGTGTGCAGTCCATCTTTCACTTGGAGAGCAAATGTTCTGGCACGCAGGTTACCTCATGGTGTACAGAATAGTTCCGTTCTGCATGATGCGGAACAGCTTGTTGGGAGTGGTCATGTTGTGTGAAATAGAACGTTTGCCATTTCGGAAAAATGTATCCGGTGTCCAGATCTTGCTGACCATTAGGTTGTTGAGACGCAGGATCTCAATGGGGCCCTCAAATTTCAGCCGGTCATCAATCCATGTTTGCCGAAAAAACACATCCATTGTGTATTCCTAAGAAATTATTATTCTTTTTTATTGTTTTATTAAATATTCACATGTAGTTTCCATGACTACAGTTTTAAATAAACACAAATCTAAACTGTCAACAGCAACCCACAATACTTTTGTATGAGTGAACACATCACCAAAGTGTCATCGGGTGTGTATATGATTCAGGTTGGTATACATTCACCACCAGGAATGGTATTTTTATCTTTTTTTTCCCCCACTAATCTTGGCAGAGATTTATCTATACTGTCTTTCGGATTGTCACAGTGTATCACATGACAAGCGAGGTGGCTTTGGACACTGTAGAAAAATAGTGTAGTGTATAACAGAGGAAAGAAAGCTGAGCCGGGACCCTCACTGTCAGGGATTGTCAACCAGATTAAAATCCCTAAGCTGCTATAATGACATCCTGCCCAAATGTCAGAATAATGAAGCCAGGCCAACATGACTAGAGGCAGTGGACATAGAAAACATGCAATTACAGTGGATTTAGGTTTATATGCATGATTGCATGCAATTGTTTTTACTCACATACCATTTCCACATCAGAAACAGGACCAAAGCTGGTGACAAAGATGTCCGTTTTAACCTCTGTGACAGGACCTACTCCAAATCCAGGTCGGAGTCTGTTGTCATATCCATCTAACAATCTATCCAAAATGCGCGTAATGTTATCCAAATATATCCTTGTCTCATTCGGTGGATTTGCCAACACCTGTCCAATACTGTAAACAGACTCAAAACCTAATTTCCATTTTCACACATGAATAAGCAAAGCAGAAAAATAAACACATGTGCAAAGTAAGATAAAAACACTTTGCTACTTACCAAGACAGGAAAAAACATGTGCGTATCCAAGCCATGCTTTACGCGCACTCTCTATCCAAGTGTCCCCTTGTCAACTGGTGTTAGTTGCACATCCCATAATTTATGTGTGCGAAAGGAGCTGGTGTGGTTGCGAGGCTTGTGTGCATATCCTAAAGCTTTTATGCTTGAAGTCTTACTGGAGTTCCTCACTGGAGTTCCTCTTCTGACTCACTCTGATGGAAAACTAAAGTGCTTTTAAAGAGGCAGAGGGATGTAACCAAAGGACATTGACAAAGATCGAATAAAGCATTATGAGAGATTAGAGGAGAAAGACTGCTGTTTGAATTTACACTATGATTGCCATTTTGTCTGCTTAAACTCTTACCAACTTTGATCATTAGTTATTGTACATTCAAATATTTAAAATCTCATGAAACTTCACTTAAAATCTTTATATTTATAATTAAATTCACCACCACTGATCTTTTTAAGCATTATATAATATTTGCCAATTACTTATTGATGAATGTTGTTTTAAAGTGTTATCAAAAGCATGTTGTCTTTGCTTACTGAAACATATACA
>TU208308
TGTGTTTGATTTCAACCTCTCACTAGACACCGTCTGTCCAATGAGATCATACTGTAGTAGACTGGAACTCTCTTGAGGAACTTCCACTGAAAATAATGGTCCTTTCTTCCATGTGTAAACAATCTCACTCATTGGGTAGGCATAGCTGCCAAATTTCAAAGGGCATGAATGTCCATCCATTGGAAAATTTATCAATCGCATGGGGCACTCTGCATTGATGGTTAACCTCATGGTGTACAGAATAGTTCCGTTCTGCATGATGCGGAACAGCTTGTTGGGAGTGGTCATGTTGTGTGAAATAGAACGTTTGCCATTTCGGAAAAATGTATCCGGTGTCCAGATCTTGCTGACCATTAGGTTGTTGAGACGCAGGATCTCAATGGGGCCCTCAAATTTCAGCCGGTCATCAATCCATGTTTGCCGAAAAAACACATCCATTGTGTATTCCTAAGAAATTATTATTCTTTTTTATTGTTTTATTAAATATTCACATGTAGTTTCCATGACTACAGTTTTAAATAAACACAAATCTAAACTGTCAACAGCAACCCACAATACTTTTGTATGAGTGAACACATCACCAAAGTGTCATCGGGTGTGTATATGATTCAGGTTGGTATACATTCACCACCAGGAATGGTATTTTTATCTTTTTTTTCCCCCACTAATCTTGGCAGAGATTTATCTATACTGTCTTTCGGATTGTCACAGTGTATCACATGACAAGCGAGGTGGCTTTGGACACTGTAGAAAAATAGTGTAGTGTATAACAGAGGAAAGAAAGCTGAGCCGGGACCCTCACTGTCAGGGATTGTCAACCAGATTAAAATCCCTAAGCTGCTATAATGACATCCTGCCCAAATGTCAGAATAATGAAGCCAGGCCAACATGACTAGAGGCAGTGGACATAGAAAACATGCAATTACAGTGGATTTAGGTTTATATGCATGATTGCATGCAATTGTTTTTACTCACATACCATTTCCACATCAGAAACAGGACCAAAGCTGGTGACAAAGATGTCCGTTTTAACCTCTGTGACAGGACCTACAGTTTTTCAAATATAAATAAGTAATAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGACAGACAGAAAGATGCTCCTTAGTTCACTCATTGCAAATATTTTAAACATAATGATCTTACAAAGCAGTAAGGCAGTTTCTAAAGATGAACTTGATGAAGCCTGACATGCAAAGTCCAGAATAATTTACAGTGAAAATTAAAAAAAATGTATTTATTAAACTATATTTAGTAACACTTTAATATGTTAAGTAATTCCAGCAGTTGCTTACCTCCAAATCCAGGTCGGAGTCTGTTGTCATATCCATCTAACAATCTATCCAAAATGCGCGTAATGTTATCCAAATATATCCTTGTCTCATTCGGTGGATTTGCCAACACCTGTCCAATACTGTAAACAGACTCAAAACCTAATTTCCATTTTCACACATGAATAAGCAAAGCAGAAAAATAAACACATGTGCAAAGTAAGATAAAAACACTTTGCTACTTACCAAGACAGGAAAAAACATGTGCGTATCCAAGCCATGCTTTACGCGCACTCTCTATCCAAGTGTCCCCTTGTCAACTGGTGTTAGTTGCACATCCCATAATTTATGTGTGCGAAAGGAGCTGGTGTGGTTGCGAGGCTTGTGTGCATATCCTAAAGCTTTTATGCTTGAAGTCTTACTGGAGTTCCTCACTGGAGTTCCTCTTCTGACTCACTCTGATGGAAAACTAAAGTGCTTTTAAAGAGGCAGAGGGATGTAACCAAAGGACATTGACAAAGATCGAATAAAGCATTATGAGAGATTAGAGGAGAAAGACTGCTGTTTGAATTTACACTATGATTGCCATTTTGTCTGCTTAAACTCTTACCAACTTTGATCATTAGTTATTGTACATTCAAATATTTAAAATCTCATGAAACTTCACTTAAAATCTTTATATTTATAATTAAATTCACCACCACTGATCTTTTTAAGCATTATATAATATTTGCCAATTACTTATTGATGAATGTTGTTTTAAAGTGTTATCAAAAGCATGTTGTCTTTGCTTACTGAAACATATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208307 False 2221 lncRNA 0.37 2 171309 173835
TU208308 True 2100 lncRNA 0.37 4 171309 173835

Neighbor

gene id symbol gene type direction distance location
CI01000040_00178642_00181455 NA coding downstream 4769 178604 ~ 182404 (+)
CI01000040_00240852_00305487 GABRB2 coding downstream 67017 240849 ~ 313275 (+)
CI01000040_00347516_00350540 NA coding downstream 173681 347516 ~ 350601 (+)
CI01000040_00366809_00384965 NA coding downstream 192874 366709 ~ 385259 (+)
CI01000040_00512880_00513451 NA coding downstream 339045 512880 ~ 513597 (+)
G183386 NA non-coding upstream 89333 78348 ~ 81976 (+)
G183370 NA non-coding upstream 123033 19599 ~ 48276 (+)
G183438 NA non-coding downstream 8632 182467 ~ 182743 (+)
G183440 NA non-coding downstream 14627 188462 ~ 188747 (+)
G183421 NA non-coding downstream 27217 201052 ~ 253362 (+)
G183420 NA other upstream 6387 157543 ~ 164922 (+)
G183366 NA other upstream 110912 53691 ~ 60397 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other downstream 800278 977184 ~ 978163 (+)
G184003 NA other downstream 1056457 1230292 ~ 1236489 (+)
G185296 NA other downstream 3159743 3333578 ~ 3333983 (+)
G185884 NA other downstream 3565152 3738987 ~ 3739281 (+)

Expression


Co-expression Network