G183440


Basic Information

Item Value
gene id G183440
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 188462 ~ 188747 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU208316
ATCACAGAGCGGGGTCAGTGCATGCTGAGGCGCACAGTGCACAGAAGTTGCCAACTTTCTGCAGAGTCAATAGCTACAGACCTCCAAACTTTGTGTGGCCTTCAGATTAGCTCAAGAACAGTGCGTAGAGAGCTTCATGGAATGGGTTTCCATGGCCGAGCAGCTGCATCCAAGCCTTACATCACCAAGTGCAATGCAAAGCATCGGATGCAGTGGTGTAAAGCACGCCGCCACTGGACTTAGAGCAGTGGAGACGTGTTCTCTAGAGTGACGACTCACGCTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208316 True 286 lncRNA 0.52 1 188462 188747

Neighbor

gene id symbol gene type direction distance location
CI01000040_00178642_00181455 NA coding upstream 6271 178604 ~ 182404 (+)
CI01000040_00240852_00305487 GABRB2 coding downstream 52105 240849 ~ 313275 (+)
CI01000040_00347516_00350540 NA coding downstream 158769 347516 ~ 350601 (+)
CI01000040_00366809_00384965 NA coding downstream 177962 366709 ~ 385259 (+)
CI01000040_00512880_00513451 NA coding downstream 324133 512880 ~ 513597 (+)
CI01000040_00554753_00561571 NA coding downstream 366006 554753 ~ 562993 (+)
G183438 NA non-coding upstream 5719 182467 ~ 182743 (+)
G183419 NA non-coding upstream 9538 131782 ~ 178924 (+)
G183433 NA non-coding upstream 14627 171309 ~ 173835 (+)
G183386 NA non-coding upstream 106486 78348 ~ 81976 (+)
G183421 NA non-coding downstream 12305 201052 ~ 253362 (+)
G183456 NA non-coding downstream 143672 332419 ~ 332645 (+)
G183459 NA non-coding downstream 148072 336819 ~ 337033 (+)
G183465 NA non-coding downstream 157627 346374 ~ 346914 (+)
G183420 NA other upstream 23540 157543 ~ 164922 (+)
G183366 NA other upstream 128065 53691 ~ 60397 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other downstream 785366 977184 ~ 978163 (+)
G184003 NA other downstream 1041545 1230292 ~ 1236489 (+)
G185296 NA other downstream 3144831 3333578 ~ 3333983 (+)
G185884 NA other downstream 3550240 3738987 ~ 3739281 (+)

Expression


Co-expression Network