G186785


Basic Information

Item Value
gene id G186785
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 5182644 ~ 5186688 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU212135
CAATGCAGAAGAGCTGAAGGCCACTATCAGAGCAACCTGGGCTCTTATAACACCTGAGCAGTGCCACAGACTGATCGACTCCATGCCACGCCGCATTGCTGCAGTAATTCAGGCAAAAGGAGCCCCAACTAAGTATTGAGTGCTGTACATGCTCATACTTTTCATGTTCATACTTTTCAGTTGGCCAAGATTTCTAAAAATCCTTTCTTTGTATTGGTCTTAAGTAATATTCTAATTTTCTGAGATACTGAATTTGGGATTTTCCTTAGTTGTCAGTTATAATCATCAAAATTAAAAGAAATAAACATTTGAAATATATCTATCTGTGTGTAATGAATGAATATAATATACAAGTTTCACTTTTTGAATGGAATTAGTGAAATAAATCAACTTTTTGATGATATTCTAATTATATGACCAGCACCTGTATCACCCAATCAAGTTTGGATGCATACAGTAGGCTATATAAAGTTTTCCTAGCACAATCACTACCATTTCTAAATCCCTAAACAGCAACAGCAGTTTATTTTTGTAGAAATGTGTTACATATAAAATGAAAATTCACAGTTGCTTGTTGTGGAATAGCAAGATGTTTAAGAATGTGTGGTGTTAGGGGAAGACATAATAGAATATGTAAAAATGAACAAGCAACTGTGAATTTTAAGTTTACATAAAATTTATTTCTACAAATATGTGCTGTATATAAAAAAAATGTTCAGTCCCACTTAATATTAGGTGTCTTTAACTACTATGTACTAACATTTAAATTATTTAATTTAATACAATGCACTTACTGTGTATTTTTTTTAAACCTGCATGTAATTACAGCTAATTAAATCTAGAATTATACTGTTGACTATTCCGTTACCTCTTAACCCACCCTTAAATCTACCCATACCACCAAACCTGTCCCTAACCTTACCCGTATCCCACTTTTCAATAGCACCACAAGTGTTTTGCAATACAATATGAACACAATAAGTACACTGTACTTATTTTTTATATAAGTACACAGTAGATAAGGACACATATAGTGTGACCAAATGACCAAACATTTTTTTGTGTACTACAGTATTGACATTACATATTAAATTTTTACCTATCTGTATCTAAAAAGCTCCATGTGTGACACAGGAGCATTCAGCTGGACAGAAACTGACATTCTTGTATAGTTTAACTAAAAAGTAGAAAAAATTTGTATATAACAAATATTTCCATAGTGAAAAAAAACATCTAAACATTTTGAGCAGCGTGGCTCACACAATGACAAAAACACTTGCTATTTTGGTGCCATTGGTCAATTTACTGACACAATAACTAGGTTTTGAAGCATGAATTAAATGCTTTGGGTGAGTAACTACATTTCCAGGCATGCACATTCTGATGTTTCAGTGAAACGTTGTGACAATTGCACTTACAGTTTAAAGGCTGTTTCGAGAAATGTGCCAAAGCGATTGAGAAAAACTGTAAATGAGGACAAAACAGACAAGACTGTCAGGGCAGGATCCTGACAGATAGACAGACAGAGAGACAGACAGACAGATAGAGAGATAGACAGACAGACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGACAGACAGACAGACAGATAGATAGATAGATAGATAGATAGATAGACAGAGAGACAGACAGACAGATAGAGAGATAGACAGACAGACACATAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGATAGATAGATAGATAGATAGATAGACAGAGACAAACAGACAGATAGATAGATAGACAGACAGACAGAGAGACAGACAGACAGAAGACGGATGGACAGACAGACAGATAGATAGATAGAAAGCAGACAGACAGACAGACAGAAAAACAGACAGACAGATAGACAGACAGACAGACAGACAGATAGATAGTAATGCTGGGTAAACAATATCGATTTCTCGATTTTAATCGATTCTCATTTTTACGAACGGATATTGATTCTTAAATCTTAAGAATCGATTAGTCTAGTCTGTTTTCAGCTGATGAATGAACAGAACATGTAGCGCGCCTCCTATCCAATAAATCGCAATAATCTTTGTTACTTTTGATATGAAGCAAAGTCTCAGATTTCAAATGACGTCCATCTTATTATGAGATTCAAAAAATAAATACAGTTTTGGCGCTGTTAAATGTGGCGTGACGGATCGCTGTAGCGCCTCAGTTAAAGAGAAGCGGCAGCACGGAGTGCATGTGAACATCCTCTCCTCCGCTTTAATACCAGTTACAGCGCGAAATAAACATGACTAAACATCTGAAGATATGTTAAAAGATACAGTACAACTTACCGAAATCCGTATCATGTGTAATAGCTCAATCAGTGTTTCAACTGCGGAAAGACGTCAATAAAACAGCTTGTAAACAATGTCACGTAACGTCACATTTACCTCAGAAAAACATATTCATTGACTATAAACTCATTAGTCAGCTAGAAAAGTGAACTCTAGAAAGCAGCATTCTGATAAATATAGCTATGCACCATTACATATTCATTATAATGTTCTTCAATATTTAATGCATGTTTGAATAAATCAGTTATGACAGCCACGATTTAAATTACAAAAAAAAAAAAAAACGAATTGGAGTAGAAATATGATTATGTAGTTCTAAACTTTATTTATTATAAAAAAACATAATTGAGTGTAATTTAAGTGTTTGTATATAAATAAGTTAATTTTAACCTTCATTATTATAGTAAAGTAGTACCAACTGACTCCCATATGTAGTTTACAGCATTAGTTGAGAGATTTTTTTCCGCTAGAAAATGTAACATGTACTGTAACTGATATACTACATCCAAAATAATCGATATCGAATCGAATCGCAAGCATGTGAATAGAAATCGAATCGAATCCTGAAAATTGTTTCAATACCCAGCCCTAATAGATAGACAGACAGATAGATAGACAGAAAAACAGACAGACAGATATTTAGATTTTGACATTATTAATTATTGTTTGCCTGTGAATCTGTGGCAGTCTTGCAGTGCACATTTTTGTCCACTAAGGTGCGCCATACAATTATACTGTAGAACTGAAAAACCAAATGTCTGTATTTTATTTTTGCATTATGTAAGTTATAATGTAAAACAAACAAACAAACAAAAAACTTTCGATTGTCAAATAATCATTAACAACATCATTACATTACTATAGCCTCATCAATTAATCTCAAATCATATATTCATAATTTAGCCTATCTTTCATGTTTGTTGTATAGCCTTCCAGATTGGATACCTACTCGTCCTTTATTATTACTCCTTTCCATAATTTAACGATAAAGTAATCAGAACTATAAAATATCACAAATGGACGGAAATTACAATGTGGTGACCAAAAATGTTCAACAAATCAAAACAGTTTTTATTAGCTTTTTCAAATTAGCTACGTCTAGAAATCACTTCACTGAAATTAAATTTTAACTTTGTAACCAGGCACAATTTATTTTAGTCTACAAAACTTCTGTACTTATTACACTATCAAGACCACATCGTTTAGGTAACCCCCCCCCATAGACCATTAAAAGCTGCAAAATGGGTTAAAACCCTTATAAGCATGTGAAAACTTCACAATTCAGTCTACGTGTTACAAGACCTACATTTCAGGTCACTAGACTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212135 True 3674 lncRNA 0.34 4 5182644 5186688

Neighbor

gene id symbol gene type direction distance location
CI01000040_05104703_05110165 KDELC2 coding upstream 71546 5104564 ~ 5111098 (+)
CI01000040_05088429_05089430 NA coding upstream 92240 5086249 ~ 5090404 (+)
CI01000040_05047319_05069572 NA coding upstream 112959 5047171 ~ 5069685 (+)
CI01000040_05033284_05043565 NA coding upstream 139079 5033199 ~ 5043565 (+)
CI01000040_05011735_05014939 NA coding upstream 167319 5011735 ~ 5015325 (+)
CI01000040_05211970_05223021 UBTD2 coding downstream 25282 5211970 ~ 5223621 (+)
CI01000040_05230946_05238111 NA coding downstream 44258 5230946 ~ 5238126 (+)
CI01000040_05264252_05286787 SYRC, RARS coding downstream 77028 5263716 ~ 5286870 (+)
CI01000040_05335852_05356848 NA coding downstream 147722 5334410 ~ 5358334 (+)
CI01000040_05552982_05558809 NA coding downstream 364998 5551686 ~ 5559364 (+)
G186815 NA non-coding upstream 28836 5153510 ~ 5153808 (+)
G186769 NA non-coding upstream 107595 5074850 ~ 5075049 (+)
G186762 NA non-coding upstream 112228 5070214 ~ 5070416 (+)
G186760 NA non-coding upstream 137059 5045050 ~ 5045585 (+)
G186696 NA non-coding upstream 166629 5015648 ~ 5016015 (+)
G186839 NA non-coding downstream 53246 5239934 ~ 5240457 (+)
G186842 NA non-coding downstream 55640 5242328 ~ 5242635 (+)
G186855 NA non-coding downstream 67345 5254033 ~ 5259349 (+)
G186879 NA non-coding downstream 132112 5318800 ~ 5389295 (+)
G186913 NA non-coding downstream 168854 5355542 ~ 5356188 (+)
G185947 NA other upstream 1208521 3973765 ~ 3974123 (+)
G185884 NA other upstream 1443363 3738987 ~ 3739281 (+)
G185296 NA other upstream 1848661 3333578 ~ 3333983 (+)
G184003 NA other upstream 3946155 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 4204481 977184 ~ 978163 (+)
G187510 NA other downstream 782357 5969045 ~ 5971732 (+)
G188149 NA other downstream 1622003 6808691 ~ 6809130 (+)
CI01000040_06833701_06848731 NA other downstream 1651436 6832987 ~ 6849135 (+)

Expression


Co-expression Network