CI01000046_05845746_05851051


Basic Information

Item Value
gene id CI01000046_05845746_05851051
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 5845746 ~ 5851184 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_05845746_05851051.mRNA
ATGAGCACAAGAAGTTCAAGCTCCCTGCTGAAGTTCACTCAGTCTCTCTCGTATACAGGCTCGCGCAAACTTTCCCCCGCGTTGAGAATGGCAGAGCCGGCACAATCGAACAGCGATGGAGAGGAGAAGAGCGAACCAATGAGAGGCTTTGCCCGACAAGGTGCCCTGAGACAGAAGAACGTTCACGAAGTCAAGAATCACAAGTTTATCGCTCGCTTCTTCAAGCAGCCTACTTTCTGCAGCCACTGCACGGACTTTATCTGGGGTTTTGGGAAACAAGGATTTCAGTGTCAAGAATGCCGGACCCCAAAGGAGCTGAGGGAGAAAGGGAATTCTTCTGCAAGGTCATGCTCAGACATGCTGAAACCTGAGGGTCTCTGCTGGAGAGCAAAGCTGTTTGTGCCTATTGTAGGTTATACCTAGAAGAGTAAAGCTCTGTTAGAGCTATGTAGGAACTATACATCTTGTTTATTATTGATGTGGTTTTGCAGTTTCTTCTTCTCCTTTTGAGTGTGTATTGTTAATGCACCAGAAGAGCAAGCTTTTCTCCTAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_05845746_05851051.mRNA True 556 mRNA 0.47 4 5845746 5851184

Neighbor

gene id symbol gene type direction distance location
CI01000046_05837676_05841480 SMARCE1 coding upstream 3921 5837676 ~ 5841825 (+)
CI01000046_05824195_05829999 NA coding upstream 15696 5823615 ~ 5830050 (+)
CI01000046_05808927_05820706 NA coding upstream 24987 5807557 ~ 5820759 (+)
CI01000046_05775279_05805016 NA coding upstream 40632 5775279 ~ 5805114 (+)
CI01000046_05756222_05757145 CDK5R1A coding upstream 88257 5756030 ~ 5757489 (+)
CI01000046_05881459_05890971 NA coding downstream 29923 5881107 ~ 5891540 (+)
CI01000046_05904400_05973821 PRKCB, PRKCBB coding downstream 53216 5904400 ~ 5973821 (+)
CI01000046_05976907_05986013 PRKCB coding downstream 125154 5976338 ~ 5987174 (+)
CI01000046_06028164_06033411 NA coding downstream 176772 6027956 ~ 6033709 (+)
CI01000046_06042369_06053825 CACNG3B, CACNG3 coding downstream 191092 6042276 ~ 6054514 (+)
G197377 NA non-coding upstream 38370 5806486 ~ 5807376 (+)
G197355 NA non-coding upstream 99328 5743569 ~ 5746418 (+)
G197529 NA non-coding upstream 125777 5716356 ~ 5719969 (+)
G197417 NA non-coding upstream 180394 5655579 ~ 5665352 (+)
G197570 NA non-coding downstream 107268 5958452 ~ 5960575 (+)
G197574 NA non-coding downstream 142289 5993473 ~ 5993694 (+)
G197593 NA non-coding downstream 159976 6011160 ~ 6011454 (+)
G197595 NA non-coding downstream 163830 6015014 ~ 6015220 (+)
G197427 NA non-coding downstream 248015 6099199 ~ 6099494 (+)
G197528 NA other upstream 103062 5726121 ~ 5742684 (+)
G197352 NA other upstream 569293 5259318 ~ 5276453 (+)
G196869 NA other upstream 1424059 4415530 ~ 4421687 (+)
G197121 NA other upstream 1474316 4371011 ~ 4371430 (+)
G197055 NA other upstream 1695966 4149423 ~ 4149780 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 968754 6808507 ~ 6821543 (+)

Expression


Co-expression Network