G197529


Basic Information

Item Value
gene id G197529
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 5716356 ~ 5719969 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU224237
GGGGGTGAGTAAATTATCAGGAAATTTTTATTTGAAAGTGGACTAATCCTTTAATGCTTGTGTTCTTATATTTGTGTAAAGCACTTGGTGTGTTTGCGGCTTTAAAAGTGCTGTATAAATAAAATTTTACTTACTAATCAACTGCAAGCTTGCATTCATTTTTGAGTGCAATGCCCACTTCTCAAAATCCAATCAACAAACAAAGGATAGAACCAAGTCCTCTCTCATGCCATACAATCCACTACACTTGGAGGTACTTCATAATACAGAAGAAAATATTTGTTACTCCTTCTGTATCTTCGCTTTAAACTATCAGTCTCCATTCTGGTATATAATGCCCACTTTCTTAGTAATTTGTGGTTTGCTTAAGTAAAGTATTTGTTTAAGTAAAAGTTTTAGGCCTTTAATTAAAATATCCTTAAAACTTAGTCAATACCAACATCCTGTCATATTCATTAAATTTAGTCTATTTTTTTCTCTGACCTTTCCTCTGTATCTATAGTTTTAGCTGATGAAGCTAACAATTTATTTGATTAAATCAAATATTCATACAATTTTCTATATTAATTTAAACATGCATCAGCATATGAAAACTGGCCTTAATGAAAACACAAACCACAGACATAATTATATAATGTGCACAGTATTTTAACACGTGGTGAATTATTTTTTTCTTATTTCCTTTTTTCTTGAACATCCTGTTTCAACTGAAGAGAAACAGTGTCAGATTCTGTGAAATGTCAGTCAGATTCTGTGAAGTGATGTGTCAGATTCTAGAAGTAAACTGAGCTGTCAGCATTTCATGTTCATTTTCAGAATGAATACGTGTAATCTGCGATGATTCACTGTGGAAAGGTCTGACCTCTACAGGCGCTGGGCAGGAACAAACACTAGCTTACACATAATGGCTGATTAGAATAAAATCTGCCATTCTAAAGTTTGCGGTCGGTAAGATATTTTTAATGTTTTTAAAAGAAGTCTCTTATGCTTAGCAAAGCTGCAATTATTTGATTAAAATGCAGTGAAACAGTAATGTTGTAAAATAATATTACAATGTAAAATAACTTTCTCATTTTAAAATGTAATTTACTCCTGTGAAGTCAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTGATATGATGATTTGATGCTCAAGAAACATTTATTATTATTATCAATGTTAAAAACAGCTGTGCTGCTTAATATTATTGTGGAAACTGTGATTTTCAGGATTCTTTTGTAAATAAAATCTTTACTGTCAATTCTAATCAATTTAATGCATCCTTGCTGAATAAAAGTAAAAAAATCTTACTGACCCCAAACTTTTAAACTGTAGTGTATTAAAGTTTAAAGCAGATATATGAACACAGAGATAAGGTTCTAGCTTGTATGGAGTTGCTACAGGTTCTGTATCTATGTGGGATCAAACCAGGGATCAAGATATTTCAAAGCAACTACTTTGATGGCTCTAAGTACAGCACACTTAGTTACCATAACACCCTTACCATCAGTTTTCATGGGTAGAATTAAATTCGGATGTGATCGTTTTCATCCAGCCTGTCAGTTAACGAAATCAAATACAAAACCACCTTAATGCCTGTGTAACTCTCCATCAGGTTTGTGATCGAGTGAGTCTGTGGCAATACTGCTTTTAGAAGACATCATTGTGACAAATATGCAACATATTATTGTAGTGGTAAATACTCACGCTCCCTCGGCTTTGAGTAGAGAGAGGAACTTGCTGACTCTGTATGCCTGATCCATCTAAGAAGAGAGTAAACACAATGTGCTATAAATAAACGTTCATTTTCGCTTGAACCACTGTAGTCACATGAACTTTTTTAAATACAGGTGCATCTCAATAAATTAGAATGTTGTGGAAAAGTTAATTTATTTCAGTAATTCAACTCAAATTGTGGAACTGGTGTATTAAATAAATTCAATGCACACAGACTGAAGTACTTTAAGTCTTTGGTTCTTTTAATTGTGATGATTTTGGCTCACATTTAACAAAAACCCACCAATTCACTATCTCAAAAAATTAGAATACTTCATAAGATCAATAAAAAAAAAGGATATTTTAAACAGAAATGTCAGGCTTCTGAAAAGTATGTTCATTTCTATGCACTCAATACTTGGTTGGGCCTCCTTTTGCATGAATTACTGCCTCAATGCGGCGTGGCATGGAGGCAATCAGCCTGTGGCACTGCTCAGGTGTAATGGAAGCCCAGGTTGCTTTGATAGCGGCCTTCAGGTCATCTGCATTGTTGGGTCTGGTGTCTCTCATCTTCCTCTTGACAATACCCCATAGATTCTCTATGGGGTTCAGGTCAGGCAAGTTTGCTGGCCAATCAAGCACAGTAACACCATGGTCACTGAACCAGCTTTTGGTACCTTTGGCAGTTTGGGCAGGTGCCAAATCCTGCTGGAAAATGAAATCAGCATCTCCATGAAGCTTGTCAGCAGAAGGAAGCATGAAGTGATCTAAAACTTCCTGGTATATGGCTGCGTTGACTGTGGACTTCAGAAAACACAGTGGACCAACACCAGCAGATGATATGGCAGCCCAAATCATCACTGACTGTGGAAACTTCACACTGGACTTCTCCACTCTTCCTCCAGACTCTGGAACCCTGATTTCCAAATGAAATGCAAAATTTACTTTCATCTGAAAAGAGGACTTTGGACCACTGAGCAACAGTCCAGTTCTTTTTCTCCTTAGCCCAGGTAAGACGCTTCTGACGTTGTCTTTGGTTCAGAAGTGGCTTGGTACGTGGAATGTGACAGTTGTGGCCCATTTCCTGAAGACGTCTGTGTGCGGTGGCTCTTGATGCACTGACTCCAGCTTCAGTCCACTCCTTTTGAAGCTCTCCTAAGTTCTTAAATCGGCTTCGCCTGACAATCTTCTCAAGCCTGCAGTCATTTCTTTCACTTGTACACCTTTTCCTACCACACTTTTTCCTTCCAGTCAACTTTCCATGAATATGCTTTGGCACAGCACTCTGCGAACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224237 True 3047 lncRNA 0.37 4 5716356 5719969

Neighbor

gene id symbol gene type direction distance location
CI01000046_05686868_05688748 NA coding upstream 26976 5684538 ~ 5689380 (+)
CI01000046_05643458_05646109 DUSP3B coding upstream 70240 5643458 ~ 5646116 (+)
CI01000046_05635252_05642052 DLX4A coding upstream 74064 5633771 ~ 5642292 (+)
CI01000046_05562155_05568637 MLX coding upstream 146893 5561957 ~ 5569463 (+)
CI01000046_05481838_05537970 NA coding upstream 178205 5481838 ~ 5538151 (+)
CI01000046_05756222_05757145 CDK5R1A coding downstream 36061 5756030 ~ 5757489 (+)
CI01000046_05775279_05805016 NA coding downstream 55310 5775279 ~ 5805114 (+)
CI01000046_05808927_05820706 NA coding downstream 87651 5807557 ~ 5820759 (+)
CI01000046_05824195_05829999 NA coding downstream 103646 5823615 ~ 5830050 (+)
CI01000046_05837676_05841480 SMARCE1 coding downstream 117707 5837676 ~ 5841825 (+)
G197417 NA non-coding upstream 51004 5655579 ~ 5665352 (+)
G197410 NA non-coding upstream 90850 5587181 ~ 5625506 (+)
G197466 NA non-coding upstream 325004 5391122 ~ 5391352 (+)
G197399 NA non-coding upstream 329640 5386470 ~ 5386716 (+)
G197383 NA non-coding upstream 332057 5381121 ~ 5384299 (+)
G197355 NA non-coding downstream 23600 5743569 ~ 5746418 (+)
G197377 NA non-coding downstream 86517 5806486 ~ 5807376 (+)
G197570 NA non-coding downstream 238483 5958452 ~ 5960575 (+)
G197574 NA non-coding downstream 273504 5993473 ~ 5993694 (+)
G197352 NA other upstream 439903 5259318 ~ 5276453 (+)
G196869 NA other upstream 1294669 4415530 ~ 4421687 (+)
G197121 NA other upstream 1344926 4371011 ~ 4371430 (+)
G197055 NA other upstream 1566576 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 1770856 3943794 ~ 3945500 (+)
G197528 NA other downstream 6152 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 1099969 6808507 ~ 6821543 (+)

Expression


Co-expression Network