G213174


Basic Information

Item Value
gene id G213174
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 235551 ~ 253062 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241817
TTGCACTCCAGGATCTCGGGGCCGTTGATGTCCACCTCATAGTATTCGGTGTCCTCGTGGCTGTCGCGCTCCTTCTCGTTGTCCAGAGCGGACTGGCGCTCTTTGCTGGCCTGGAGTTTGCGCATGGCACTGAGGTTCTCGGTGAGGCGGCTGACCTTCTCGTGTTGCTCAGATAGAGCTCCATGAGCCTGTTCCAGCTGCTTCTGAGATTCCTGCAGGGTCGACAGCAATGTCACCTTCTCCCGCTCCACCTGCAGCAGCTGTTGTTTCAGCTTCTGGATCTCAGAGATGTTGAGTTCGTTCAGTAGGTTGTCCACGAGGCTGGAGGACGGCTGGAACAGATCTCCTTTTTTGGGTGTGGACACACGGTTGTCGTTGTTGTTGGCGATCTTGTCGAAGCCGTTCTCATAGACGTGGAGGGGTTCGTCGTTGTTGGGCTCGATCGAGGTGTCGTCGCTAAACTTCAGCCCATCGAGGGAGATGCTCAAAGGACTGTGGTACATAGAGTCCCCGATGGTCATGTACTGAGACAACTCCTTCCTTAAGGCGGCCTTCTGCTCCCTCTCAGTCTTGATGGTCTCCAGCGCCTCTCCCAGCTGCCTCTCAGCGATCTCCTTCAGACGGATGGCATCTTCCAGCTGGCTGTTCAGAAACTGGGTGTCTTCCTCCAGACGCCGGAGTTCATGTTTTAGACCCTCAAACTCAACCTGGCCCTGCTTTAAGACAGAAACATGTTTCTGGAGGGTGATGTTCTCCTCCTCCAGCTCGCTGTAGTCCTGCAGCAGACGAGCCTCTCGGATCTTGAACTCCTTGATGTCGTCCCGCAGACGTGACCTCTGCAGCTCCACCATCTGACTGTTCTCTCTCAGCTCCTGAGTGATGGTGGCCAGGCGTTCGTTCTCTGACTGGGCATTGGTCAGGATATTGCGTGCTTGTCTCAGTTCTGTCTGCAGCTCTTGCATGCGCTGCTCGTAATACGCCTCCTTACAGGCCGACTCCTGGATGAGCGTCTCCTCGCGGCTCTCGCCGTCAGCCGCCACCTTCCTGTGGTTGGAGTGCGCCTGTCCAAACGCCTCTCGCAGCTGCTCCAGCTCCTGGCGGACGCTCTCATATTCCGCCTCCAGCTCGTCGTACTGCTGCTTGAGCTGCTGTTTCTCCTCCAGCACCGCCAGCCCGTACTCCGCCGCCTGGATCTTCTCCTGCGTGGTCTCGGCCAGCTCCCGGGACAGCCGCTCCACCTCCTCCTGCTGCTCCGCGGACATCTTTAACGGCAGACGCTTCAGACTCCCCCGTGCGCGCGCTGCATGACCGCCTTCACTGATATATTCCCGCTCGGGAGCGGGTGATGAAGGGTGTCGTTCTCCAGGGGCAGAGGAGCTTGTGCTTTATTGCTCCATGACCGCGGATCGTTCAGCTCCTCTCCGCTCCTCTCCCCCTCAGTAACATGGAGAGGAGAAGAGGCTGTAATCTGCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241817 True 1476 TUCP 0.58 6 235551 253062

Neighbor

gene id symbol gene type direction distance location
CI01000050_00219042_00231878 NA coding downstream 3673 218825 ~ 231878 (-)
CI01000050_00160246_00185242 NA coding downstream 50209 159328 ~ 185342 (-)
CI01000050_00071592_00091705 PRICKLE2A coding downstream 141980 71364 ~ 93571 (-)
CI01000050_00272347_00273047 NA coding upstream 17879 270941 ~ 273941 (-)
CI01000050_00278324_00281820 NA coding upstream 25069 278131 ~ 281820 (-)
CI01000050_00286164_00294317 NA coding upstream 32196 285258 ~ 294317 (-)
CI01000050_00362015_00370409 TMCC1 coding upstream 107338 360400 ~ 370409 (-)
CI01000050_00468156_00477480 CRELD1 coding upstream 214306 467368 ~ 477480 (-)
G213201 NA non-coding downstream 104745 119647 ~ 130806 (-)
G213176 NA non-coding upstream 9068 262130 ~ 267447 (-)
G213265 NA non-coding upstream 44175 297237 ~ 297641 (-)
G213289 NA non-coding upstream 160316 413378 ~ 413588 (-)
G213297 NA non-coding upstream 180645 433707 ~ 434206 (-)
G213171 NA other downstream 217570 16080 ~ 17981 (-)
G213429 NA other upstream 576280 829342 ~ 829802 (-)
G213497 NA other upstream 730416 983478 ~ 996539 (-)
G213704 NA other upstream 1059921 1312983 ~ 1317106 (-)
CI01000050_02230904_02233429 NA other upstream 1979586 2228865 ~ 2233429 (-)
G213948 NA other upstream 2075451 2328513 ~ 2331316 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00017244 LOC104966709 coding CM030122.1 CM030122.1 51624052 ~ 51627775 (-)