CI01000050_00278324_00281820


Basic Information

Item Value
gene id CI01000050_00278324_00281820
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 278131 ~ 281820 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_00278324_00281820.mRNA
ATGGCAAAGAGGTGTGTTTTCGGTTGTCTTCCTAACAAAACCCTGTTCAGTGTCCCGAGACCGCGTTGGTTACGGGCCCGCTGGCTTGAGTTTTTGCATTTTAAAGAGGAAGGATTGACGGTGAATTCGCGGCTGTGTTCGAGGCATTTCACGTCCGAGAGCTTCCAGAATTTAACACAGTACGAAATGGGCTTCGCGAAGGTCCTGTACCTGAAGAATACTGCCGTTCCGTCGGTCTACACGGTTGGGGCACCACAGAGCATGAAGCCTCTGACGCGAGATGTGGGCTGTCAGTGCAGCGATCAAACTTCGAAGAAAAGCGCGTCGGTTCAGGCGTCATGCGCGACACCGCGGCCGAAGCGACGTAGTAAAGCTGTTCAAGTGAAACCTTTAGTCACCGCCTCCTCTGAGAATCACAGCGGAACATCGACGCCAGTGACGCGGCCACGGATGGAGGAAAGCGCCGCTGATTTAAACCACAGCTCGATGGTGACGATAAAAGAAGAAACAGATTTCACCTACGAGCCTGAAATGACAGAAGACGATAAAAAGGCGGAGGACGTTCAGTTAAATCTGGATATGACTGTGGAGAGTTTCTGTGCGGGACATGAAGAATCACTGGAGCGAATCCTCCAGACCGCTGAAGAAGAAGAAGCTGTAGAGTGACGTCCAACGCAAGATGTTCACCATCATGACATGAGACTTCACTGACTCTAGAGCAGCGACTGTGGCTGAAACCAGGTGAGAACCTTTACATTTCACAAGTGAAATTATACGAACATTAGTTCTGTACCTGATCAGACAGAGACAGATTTATGATTACAAAAAGACTGAATATTACATTTTCAGAAAGAAAAAA

Function

NR:

description
hypothetical protein EH28_18536

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_00278324_00281820.mRNA True 859 mRNA 0.49 4 278131 281820

Neighbor

gene id symbol gene type direction distance location
CI01000050_00272347_00273047 NA coding downstream 4190 270941 ~ 273941 (-)
CI01000050_00219042_00231878 NA coding downstream 46253 218825 ~ 231878 (-)
CI01000050_00160246_00185242 NA coding downstream 92789 159328 ~ 185342 (-)
CI01000050_00071592_00091705 PRICKLE2A coding downstream 184560 71364 ~ 93571 (-)
CI01000050_00286164_00294317 NA coding upstream 3438 285258 ~ 294317 (-)
CI01000050_00362015_00370409 TMCC1 coding upstream 78580 360400 ~ 370409 (-)
CI01000050_00468156_00477480 CRELD1 coding upstream 185548 467368 ~ 477480 (-)
CI01000050_00552377_00552664 NA coding upstream 269669 551489 ~ 552861 (-)
CI01000050_00560254_00585128 BRPF1 coding upstream 278163 559983 ~ 586312 (-)
G213176 NA non-coding downstream 10684 262130 ~ 267447 (-)
G213260 NA non-coding downstream 28394 249445 ~ 249737 (-)
G213188 NA non-coding downstream 31975 205108 ~ 246156 (-)
G213256 NA non-coding downstream 38206 239663 ~ 239925 (-)
G213265 NA non-coding upstream 15417 297237 ~ 297641 (-)
G213289 NA non-coding upstream 131558 413378 ~ 413588 (-)
G213297 NA non-coding upstream 151887 433707 ~ 434206 (-)
G213298 NA non-coding upstream 152743 434563 ~ 434797 (-)
G213299 NA non-coding upstream 157007 438827 ~ 439030 (-)
G213174 NA other downstream 25069 235551 ~ 253062 (-)
G213171 NA other downstream 260150 16080 ~ 17981 (-)
G213429 NA other upstream 547522 829342 ~ 829802 (-)
G213497 NA other upstream 701658 983478 ~ 996539 (-)
G213704 NA other upstream 1031163 1312983 ~ 1317106 (-)
CI01000050_02230904_02233429 NA other upstream 1950828 2228865 ~ 2233429 (-)
G213948 NA other upstream 2046693 2328513 ~ 2331316 (-)

Expression


Co-expression Network