G213188


Basic Information

Item Value
gene id G213188
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 205108 ~ 246156 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241854
ATTTATTTTCTTCTTTTACAACACAAGACATTCTTTTCAGTTTTGTAGCTGATTGTGATCAAATACCTTTTGTTTGTTTTTTCAGTCCGCCCAAAAAAAAAGGCCTATGCAAGAGTGCCTTCTGTTTACCGCTAGGTGGAACAAACTGTGATTTGCACTACTGTCTGTTAAAAATAAATGAAAAGAAACGTAGCATTGTGGATTTGTTGCTTTTTCCTGTTGTACTGTACTGGTATTGAACCATGACTTCTGTGTACCGTTATCCCCCTAATAGTCACAACTAAATATCGTAACAGAACTTCTTGCAACAAAATGAACATGTGACGATATGTTGAACAGGTGTTTCACTATATTGTGTATTTTAGCATGACTGGATACTGATGAGAAGCTAGAACTGTCTGTTTTAGATGTTTGTGATAAATTATGTGCCCACCATCATAAGAAGAGTGTAAGTAAATAAAATATGGCTGTGATTAGAATAATTCATAAGAATCAGTACTTTATTAAAAACTAATGTGCGTATATACAGTCTGTGCAGTTTCATCAGTGCTGTCAGTCAGAGCTGTTGAACAGTATCTTCAAACAGTACAGTTTGACTTGCATGAGTCATAATTGGATTAATGCGTCTTGAATGAACATACATTTGAGTACTCAACATTATATTGCACTTATTTCAGATGTGGCCATATTTGGGTTAGCATAAGGAAAGTAAGGTTTATGTGGAATTCATTTTATTGTCTTTAAGGAAATGTCTGCGTGACTCATGTGCTCTATGTAATGTCATATGACAGCTTTGTGTGATGAACAGACTCAAATTGCAGTAGTTGTTCAGTGATGTTTGGCACAGCTCTCAAATCTCATTCACACGTGTGTGTTATTGACATCAAACTCCTTTTAATGGCACCAACAGTCAAATTATGTAGCCATTTTGTCTCAGATCCTTTAAACTAAATCATTTTGAAAAATCTCTCTATATGAGGTGTCTTGTATCTTTTTTTTCTTTTTCTTTTTTTTCCAGAATAATCCATCTTGATATTGCTTTCAATAACAGCACAGTACGATAGCTGGTTAGTGATTGTGTAAGTCATGCGGTTGTGGACTGAAAAGCAGGTGTGATGGTTTGATTTGAGTTCTGACTCTAGATCGTGTGTGTATGAAGAAATGTTGTAACACATTGTCTTAACCAGATGCGATAAAAGGCGTCTTTTCCATGTTAATCAGAGTTTTTGTCCTAACCAGTGAGCTGGAACAACAACATACAGAATATGATCGAGCTGCACGATTAATCGTTAAAAGATCGCAGTCTGGATTCGAACACCCACACGATCTTATTTGTATTATTAAATGACAGCAATTCAGCTGTATCTATTAAACACAGCAAACATTCAGATCTGTGTTCTGATCCAGAGAGAGCAGTTGTCAAATATAGATATGAAACAGCTTCACAAACAATAATTCAGATTATCACAGAAGTACTGGATAAAAGTTTATAGTTCAGATATAAACACTGATGTCTACAGTAGAGATCAAAATAGAGTAAATCACCTTTTGAAAGTAACTTGACGCTTCAAATAAAGATTGTATTAATTACATCATTACACCGGTAGGTGGAGACAAGTGACTGTTAAATTTTTTTCATTGGATCATTTAAGAAATTCTTTCAAAAATACTGATTCATCCAGTAATGAAACAAGTGAGTCATTGAATCATTCACTCAAGCCATTTAAAAAAAAAAAAAAAAAAAAATTCAAATGAATAAGACATCTATTAAATAGACTGTCAATTAAGATTTTGTCAGAACCTCTAGTAAATTACATGTTATTTTGTTTAGTTGTCTGTTCAGAATCGTGAGAGAATCGTAATTGTGATTCTCCATTTATCCAGAAGCGTGCAGCTCTAGAACATAACAATGAGAATCACAGGTTCTGATTATGTGCTTTATTAAATGTTAAAAGAATTTAATGTGAGTTTGAATATCATTTATAGCTGTACTTAAAGTGACAAATAATTCACCTCAGACCTTGAAAAATGAAAGGAAACAGAACGTGTAAACTGCAAACAAACAAGTGTGTTCTATGACAAAGACTGATTCAGTCAGTATGTATTTTTAATAATGTTAAAATGGTTTAATATTTATTAATTTGATTACTTATCCATTTGGTTGTGAGTGCACTGTGTTTTCAGAGAGACTCCGCCCACACGCTCTTCTGATTGGCTGGTTTTGTGATTGATTTTGTGTCTCGTAGTCGTGTCGCCTCTGGTGTGGACAGACATACTGTTTGTTGCAGACGGTGTAATACTTTGTGAAGTGTTTCCTGCACATGGAGATGTTTTTCTCATTGAGTATATTAAAGGAGACCCATATTTCAGTTGGATATCAATTGGTTATGAGCATCTCTGTGCTCATGGGACACGTGAGATGAATCTAGTGGAAAATGATATCACAGATAGAGACAGATAGTTTGTGTCCAGGTTCAATATTTTGACATGGTGTGATCCAGGCAGAGACGAGGAGCAACTTGAGCTGAATATCTTCCACGTCTAGCTCATAAAGGACAGATGGCTCTTGGTTCTCTGCTTTCAATCTCTGTCTCACACACACACACACACACACACACACACACACAGCTTATCCAATTCATCTCGGCATTGTGGTCGGCCCAGTGCTGCACAGAGACTCTTTTCACGGGCGAAGCGGGCAGCTGCAGCGTGAGGAAGCGACACACTGAGAGATCCGCCAATCTTATGCTAGGAGAGAAAAACAGTGCAATAAGAGGAAGAGGCCTGAGGTTTGTGACGGTGGGCGGAGCTTGTGAAGAGGGAGGGGCGTGAGTGGTGTCACAAACAGTCGAGGTCAGGGCCAGATGCTCTCCAAACAAAGGAGCATTTCTCAGGAAACGACACTGGGAAGCGTGGTGCTCGCCATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGCTGCATTGCAGAGGTCTATGGGACTCATTTGCTTTAATGACTCACATTCACCCTTTTTATTTGGCTCCAGGCCTAATGGCTTTTCTGCCTACATGTGTTGTTGTGAACTGACCTGTAAGACTTTAAACATGTTAACACTTCAGCTTTGAATAAAATCAAACTTTTCTTTCTGCAGGTTGCGTCATTATGTCAGTCTTAATGAGTGAGTTATTGAATTATTCACTCAAGCGATGAAACTCACTGCTGTGACGCACAGAGGTTGATTCTGCTCTCGCTTTTCTTTGGTCGTCCTGACAGCAGTTTCTCTGGCTGTACTGTCAGTGTGGGTGTGTTCAGAGCTTCATCATGTGACACTGAAGAAAACTAAGCAGTCAAAATGTAGTGTTATTCGTCTCTCGTCATGAGCGTAGTTGGTTAGGATAAAAACTCTGATTGTTAACTTCTTGTTTATTGAACTGTTTCATAAAAGCAATAGCAGAGTTGCAGTTTGGTCTGAAAATGAGTGCGGCCTGGAAAAGACAAGTTTTACATTTATTATTTATGTTTACATAAATTTATTTATTTATTTATTCATTTTTCAGGCATATGTTTTTCGGTGGGTTGATATTGTCAAGAGATACTGTATGTACTTTCATAGTTTCCTCATTTTAAAACATTTGTTGTAAAATGTTATATTAAAGGCACAGTGTGTAGGTTTCTCCACTAGAGGTCGCTTATTCAAAACAATAAAAAAGGTAAAGCCGTGAATGAGCGTGGAATCATGGGAGTTGTCGTCTTCACCTCCACAGCCGATGGAAATCAATCCGACGGGACTCGGGCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241854 True 3787 lncRNA 0.38 2 205108 246156

Neighbor

gene id symbol gene type direction distance location
CI01000050_00160246_00185242 NA coding downstream 19766 159328 ~ 185342 (-)
CI01000050_00071592_00091705 PRICKLE2A coding downstream 111537 71364 ~ 93571 (-)
CI01000050_00272347_00273047 NA coding upstream 24785 270941 ~ 273941 (-)
CI01000050_00278324_00281820 NA coding upstream 31975 278131 ~ 281820 (-)
CI01000050_00286164_00294317 NA coding upstream 39102 285258 ~ 294317 (-)
CI01000050_00362015_00370409 TMCC1 coding upstream 114244 360400 ~ 370409 (-)
CI01000050_00468156_00477480 CRELD1 coding upstream 221212 467368 ~ 477480 (-)
G213201 NA non-coding downstream 74302 119647 ~ 130806 (-)
G213260 NA non-coding upstream 3289 249445 ~ 249737 (-)
G213176 NA non-coding upstream 15974 262130 ~ 267447 (-)
G213265 NA non-coding upstream 51081 297237 ~ 297641 (-)
G213289 NA non-coding upstream 167222 413378 ~ 413588 (-)
G213171 NA other downstream 187127 16080 ~ 17981 (-)
G213429 NA other upstream 583186 829342 ~ 829802 (-)
G213497 NA other upstream 737322 983478 ~ 996539 (-)
G213704 NA other upstream 1066827 1312983 ~ 1317106 (-)
CI01000050_02230904_02233429 NA other upstream 1986492 2228865 ~ 2233429 (-)
G213948 NA other upstream 2082357 2328513 ~ 2331316 (-)

Expression


Co-expression Network