G213260



Basic Information


Item Value
gene id G213260
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 249445 ~ 249737 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU241927
TGATCAATAGGTCATGAGGGATACGGGAGGGTCTGATTACCATAATGGAAAGAACTCTCAAGGTGCTGCTGTTTAAAGCAAACAACGGTCTCGTATTGGTTCTGGCAAACAGTGCACACATCACCACTGGAGGTCAGAGTTTGTAGGTTGATTCCTGACAGATGGCTGAACTGACAGCTCGTGGGTCAGATGGGGTGGAGCACTAAACACAACCTCCACTAATAGGATTGAAGCAGTCCAGCTGTCAGCCAATCAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU241927 True 256 lncRNA 0.48 2 249445 249737

Neighbor


gene id symbol gene type direction distance location
CI01000050_00219042_00231878 NA coding downstream 17567 218825 ~ 231878 (-)
CI01000050_00160246_00185242 NA coding downstream 64103 159328 ~ 185342 (-)
CI01000050_00071592_00091705 PRICKLE2A coding downstream 155874 71364 ~ 93571 (-)
CI01000050_00272347_00273047 NA coding upstream 21204 270941 ~ 273941 (-)
CI01000050_00278324_00281820 NA coding upstream 28394 278131 ~ 281820 (-)
CI01000050_00286164_00294317 NA coding upstream 35521 285258 ~ 294317 (-)
CI01000050_00362015_00370409 TMCC1 coding upstream 110663 360400 ~ 370409 (-)
CI01000050_00468156_00477480 CRELD1 coding upstream 217631 467368 ~ 477480 (-)
G213188 NA non-coding downstream 3289 205108 ~ 246156 (-)
G213256 NA non-coding downstream 9520 239663 ~ 239925 (-)
G213201 NA non-coding downstream 118639 119647 ~ 130806 (-)
G213176 NA non-coding upstream 12393 262130 ~ 267447 (-)
G213265 NA non-coding upstream 47500 297237 ~ 297641 (-)
G213289 NA non-coding upstream 163641 413378 ~ 413588 (-)
G213297 NA non-coding upstream 183970 433707 ~ 434206 (-)
G213171 NA other downstream 231464 16080 ~ 17981 (-)
G213429 NA other upstream 579605 829342 ~ 829802 (-)
G213497 NA other upstream 733741 983478 ~ 996539 (-)
G213704 NA other upstream 1063246 1312983 ~ 1317106 (-)
CI01000050_02230904_02233429 NA other upstream 1982911 2228865 ~ 2233429 (-)
G213948 NA other upstream 2078776 2328513 ~ 2331316 (-)

Expression



Co-expression Network