G216178


Basic Information

Item Value
gene id G216178
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 5875493 ~ 5876521 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU245234
AAAGTTACAGGTAGCACGTGACTACTGTGAACGCAGCATAATCCCCGTCATTTTCTAGAAGGGCCCAAGAAAGTGAATGTTTCCCCAAGAAAATTTTTATTTGTACCATTAACCATTATGAATTTTTCTCGTTTTTATTGTGTTTTCTTCCAAAAATCCATGGCATGACTGATTCATAAACACGACAAGAACAAGCAACATTAAGCAGTAAGAAAACAAACCATATGCCAGACTGTTTTCAAACAGCAGCACCAATTACCTGAAGGGCATCAATACTCCCTTCAATAAATGACAATAAATAAATGAGTAAAATGCCACTGCATATACATGACATATTGCATAGTGATCTGTAAAACTGCTTTCAACATCATTATCAAAAGATGCCTTTATGTTACAAAAAATGTGGAAAATATATATACACACTGACATATTCACAATGTAAGGCACTGCGTCAAAATGTTCTTGTTGATTATTTTTCTAGCCTCCAGTGGGACTATGCACTCAAGAGTCTTCTGAATTCAAAGCAAATTCAAGATTCCAATAAAAAGAAGTTCAAGGATCCACAAATGAGACAGCGATGTATCTAACCCCCTCCACAGTGGGCAGACCCTCATGGTAGTGAGTGAGGCGTCCAGGGTGCATGAGCGCCCAGCCCTTCCTGGGAGCTTTAATGGAGCAGTCGTACCTCAAGAACCGACAGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245234 True 703 lncRNA 0.39 3 5875493 5876521

Neighbor

gene id symbol gene type direction distance location
CI01000050_05851079_05852014 NA coding downstream 23429 5850987 ~ 5852064 (-)
CI01000050_05800641_05808346 TPRG1L coding downstream 67147 5800004 ~ 5808346 (-)
CI01000050_05766242_05770223 NA coding downstream 105270 5765796 ~ 5770223 (-)
CI01000050_05728696_05760342 TP73 coding downstream 114689 5728465 ~ 5760804 (-)
CI01000050_05717074_05720876 RER1 coding downstream 154366 5716554 ~ 5721127 (-)
CI01000050_06320386_06342648 CLCN6 coding upstream 443177 6319698 ~ 6342648 (-)
CI01000050_06359307_06399573 NA coding upstream 482711 6359232 ~ 6399597 (-)
CI01000050_06401583_06407303 PEX10 coding upstream 524870 6401391 ~ 6407323 (-)
CI01000050_06638872_06648965 KANK3 coding upstream 762351 6638872 ~ 6649572 (-)
CI01000050_06666826_06671632 NA coding upstream 790193 6666714 ~ 6671891 (-)
G216181 NA non-coding downstream 31434 5843212 ~ 5844059 (-)
G216176 NA non-coding downstream 33787 5840252 ~ 5841706 (-)
G216180 NA non-coding downstream 35336 5839226 ~ 5840157 (-)
G216187 NA non-coding downstream 59955 5815303 ~ 5815538 (-)
G216146 NA non-coding downstream 77268 5795380 ~ 5798225 (-)
G216177 NA non-coding upstream 23594 5900115 ~ 5907319 (-)
G216205 NA non-coding upstream 31206 5907727 ~ 5907964 (-)
G216206 NA non-coding upstream 32056 5908577 ~ 5909034 (-)
G216209 NA non-coding upstream 49824 5926345 ~ 5926567 (-)
G216212 NA non-coding upstream 69722 5946243 ~ 5946506 (-)
G216093 NA other downstream 323390 5489557 ~ 5552103 (-)
G215935 NA other downstream 802384 5048916 ~ 5073109 (-)
CI01000050_04564233_04580815 KANSL3 other downstream 1262601 4563687 ~ 4581278 (-)
G214436 NA other downstream 2286436 3525816 ~ 3589057 (-)
CI01000050_03491159_03514757 NA other downstream 2364702 3491088 ~ 3514757 (-)
G216408 NA other upstream 479496 6356017 ~ 6356511 (-)
G216931 NA other upstream 1287574 7164095 ~ 7165401 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location