CI01000054_00965111_00970121 (LYPLA2, LYPA2)


Basic Information

Item Value
gene id CI01000054_00965111_00970121
gene name LYPLA2, LYPA2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 964642 ~ 970121 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_00965111_00970121.mRNA
CACTCCTCACATTGTATGTGTGGCAACAATATGTCTGTACCTCTGCTCGCTGAAGCCGTGACGGTGTCCGGGACGGAGAAGGAGACGGCTGTGGTGATCTTCCTTCATGGCTTGGGTGACACAGGACACGGCTGGGCTGATTCCATGATGTCTATCAGACTGCCGTACGTCAAATACATCTGCCCACACGCACCCCGAATCCCTGTAACGCTGAACATGAAGATGACCATGCCCTCATGGTTTGACCTGATGGGCTTAAGCCCAGAAGCCCCAGAGGATGAAGCAGGGATTAAGAAAGCAGCAGAGAACGTAAAGGCCATCATTGATCACGAGGTAAAGAATGGTATACCATCCAATCGTATTATTCTTGGTGGCTTCTCTCAGGGTGGAGCTCTGTCTCTCTACACCGCTCTGACCTCTCAGCAGCAACTAGCGGGTGTTATTGGACTTAGTTGTTGGCTTCCACTTCACAAGACTTTCCCACAGGCTGCAAGTGGGAGTGGAAACAAGGGCACTCCCATTCTGCAGTGTCATGGCGAGATGGATCCCATGATCCCGGTGCAGTTCGGGGCCATGACAGCAGAGAAGCTCAAGACCATTGTCTCTCCACAGAATGTCACCTTCCGCAGCTACCCGGGTCTCATGCATAGCTCCTGTCCTCAGGAAACAGCCATGATCCCCTACAACACGAACCATACATGCGCATGAACATTCAGTTGTACATACTGTGAACATGCAACACCACGTCATCTCACGCCTTTCTTTGTAATTTCATACCTCATTAAAAAAGTGATATTATTATTAGTGACAACATTTGGCATCCGTACATACAATAGTATCCCATGAAACCTTGCTCTTTACTTTAAGGGAGACTCATTAACTTTCATCATACATTCCTGTAAGCATTAAATCCGTTTCCCAGTATCTCAGTATCAGTCTCTTTCTCTCAAGCAAGGCGGGAAAGGTAACATTTTTCTAGACGGCTCTGTAGCAGAACTTGGGAGACAGTTCAGATGCTGCAAATCTGTGGTGGTGGAGGAAGTTAGTGAGAGCCGGTGCTGTCTGGAGTGACTCGCGTCACGCTGCTCTGCATGCTGGTCTCATGGTGCATGTCTGCAGTGGGGCTTCGTCGGGATGCTGCAACTCATACTTTTGTTTGTTTGTTTTAGCAAATAAA

Function

symbol description
lypla2 Predicted to enable carboxylic ester hydrolase activity and palmitoyl-(protein) hydrolase activity. Predicted to be involved in protein depalmitoylation. Predicted to be active in cytoplasm. Orthologous to human LYPLA2 (lysophospholipase 2).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K06130 LYPLA2; lysophospholipase II

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_00965111_00970121.mRNA True 1177 mRNA 0.49 9 964642 970121

Neighbor

gene id symbol gene type direction distance location
CI01000054_00929337_00955240 ANKIB1A coding downstream 8968 929132 ~ 955674 (-)
CI01000054_00924015_00926256 GATAD1 coding downstream 38386 923734 ~ 926256 (-)
CI01000054_00898039_00902381 NA coding downstream 62261 897542 ~ 902381 (-)
CI01000054_00888859_00895223 LRRC14B coding downstream 69419 888448 ~ 895223 (-)
CI01000054_00195914_00197098 NA coding downstream 767423 195226 ~ 197219 (-)
CI01000054_00974025_00979306 PITHD1 coding upstream 3779 973900 ~ 979306 (-)
CI01000054_00979998_00989171 TCEB3 coding upstream 9877 979998 ~ 989171 (-)
CI01000054_01115294_01116274 GPR3, GPR6, GPR186 coding upstream 144572 1114693 ~ 1116822 (-)
CI01000054_01151083_01156699 FAM83HB coding upstream 180603 1150724 ~ 1158172 (-)
CI01000054_01203148_01209012 PPT1 coding upstream 232784 1202905 ~ 1209135 (-)
G230328 NA non-coding downstream 49285 915135 ~ 915357 (-)
G230145 NA non-coding downstream 76483 885254 ~ 888159 (-)
G230148 NA non-coding downstream 78417 863958 ~ 886225 (-)
G230311 NA non-coding downstream 103396 860921 ~ 861246 (-)
G230308 NA non-coding downstream 107081 857336 ~ 857561 (-)
G230238 NA non-coding upstream 23271 993392 ~ 996451 (-)
G230335 NA non-coding upstream 35145 1005266 ~ 1005502 (-)
G230336 NA non-coding upstream 45602 1015723 ~ 1019141 (-)
G230341 NA non-coding upstream 50553 1020674 ~ 1020880 (-)
G230342 NA non-coding upstream 59500 1029621 ~ 1029829 (-)
G230178 NA other upstream 215412 1185533 ~ 1230135 (-)
G230923 NA other upstream 1867116 2837237 ~ 2837682 (-)
CI01000054_02857402_02860451 NA other upstream 1884020 2857402 ~ 2860573 (-)
G230908 NA other upstream 2087527 3057648 ~ 3063343 (-)
G231645 NA other upstream 3011726 3981847 ~ 3982823 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014305 lypla2 coding NC_007130.7 CM002903.2 43884120 ~ 43901467 (+)