CI01000054_01115294_01116274 (GPR3, GPR6, GPR186)


Basic Information

Item Value
gene id CI01000054_01115294_01116274
gene name GPR3, GPR6, GPR186
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1114693 ~ 1116822 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_01115294_01116274.mRNA
AGTTCAAAATAGCCTTTCCATGAACAATGGCTAAAGAACATAAATATAAATAAATAACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGATCACAGGAATAAATAACAGTTTAAAATATATTCACCAGTTATTTTAAATTGTAATAATATTTCACAATATTACTGTTTTTACTGTATTTTTAATCAAATAATTGCAGCCTTGGTGAGCATAAAAATCTAGTTTGTAGTAATAGTGTATTTATATTATATTATGTATACATGTTTTTAATGCAGAATGTGTACATATATTATAATTAAATATTATTTTTACAAATTGTGTTTTCAATTCGCTTTTGCCCTTGCTAGCATCTCCAGCAGTACTTGTAGTGTGCAGACTAGGGATGTCAATTTGAATAAGATGTTAACTGCTGTTCATCTTACTCTGCATGTCATCATGAGGTCAGACGTTAGTGTGGAGTGCAGAAGCTCTAGTGCTGAACAGAGTGACAGTCACCCTGCTGTGGATTGCGTGACTAAGCCTTCTTTCCCTCCCTCACAGAAATGGCCCTGAACAACTCTGAAGTGGGCTTAGAAGTCATCTTGGCGATGGACCAACTGCTGGAGCTCACCCCGTCCCATGTGACCCCTAAACCCATGGAGTCCACATTGATGACCCCATGGGACGTCGCCCTGTGCGTATCAGGAGTCTTGATCTGCTGTGAGAATGCGATCGTCGTGGCCACTATCCTCTCCTCGTCGTCTCTGAGGGCACCTATGTTCCTGCTAATCGGCAGCCTGGCCTGGGCGGACTTCCTGGCAGGGGTGGGGCTCCTTTTGCACTTCCTGTCTCGGCGATGCGTGTACTCGGAAGCGCTAGAGCTGGGCAGCGTGGGTCTGTTGGTGAGCGCGCTCAGTGCGTCCGTGTTCTCTCTGTTGGGCATCACCCTGGACCGCTTCCTCTCGCTGCATCGCGCGCTGACTTACGGGTCCCGCCGCACTCACGCGCAAACACTCTGCGCTCTGGCCGTTGGCTGGACTATTGCGGGTCTTCAGGGCGCACTGCCTGCCTTGGGCTGGAACTGCTTGCATGACGGAGAATCCTGCAGCGTGCTTCGCCCTTTGACCCGAGTGCACCTCGCGACCCTGTGCGGCGGCTTTCTGCTGACCTTGGCTTTGATGCTGCAGCTGAACGCCCGTATCTGCAGCGTCGTACTTCGGCACTCGCACCAAATCGCCCTCCAGAGGCACACGCTCCCATCCGCTCGCACGCATACGCGTCGTCGGGTTCACACTCTCGCCCTCATCCTCGCCACATTCGCCAGCTGCTGGATGCCCTTCGCCTTGTACGGTCTTCTGGCCGACGGATCGTCGCCGGCTCTGTATACTTACGCCACATTGGTTCCGGTCACAGGAAACTCTCTGCTGAACCCTCTGATCTATGCCTACAGAAACACACACATTCAGAGAGTGTTGCGACAGGCTTGCTGTTGTTGTCTACCAAACACACCCAGTAAAAACACACACACTCCCAGTGATGTCTGACATCAAGTGCTGAACACTTCAGAAGATTCTATGGTGCCATTAAAGATTGTGTTTCACATTTTATGTCTGTTCCTGTTTGGGAACGTCACTGTGCCAGTTGCCAAATCTCCTGTCTGAAAAGTTAACATGACCACTGTCAGTGACCTGATCTACTCTGCATTGTTTTATTTAACTCTAAAAAGGGTTTATGTAGCAGTGTGTGTCCTTTTTTTTATGTTATATTGAGAAAACTGCCACTGTATCCTTTTAGCTAGTTGCCAACTAAAGGGGTCCAAGCAGAAGCTCTCCTGTTCGCTTTAATGTCTCAGATTTGTGCCTCATTTTATGTCCTCTGAAGTACAGAGTTACTGATGGAATCAAAATCATTTGCACTTTATGACAATGACTTGACTTTTAAGCTGAAACTTGTTTGAATTTCGTTCGTTTTTACCAATCAATCAAATGATTTGCCGTTTGTTATTCTGGCTGATGTTTTTTATACTTCATAAATGTCATGTTTGCACTTACAATGTATTAATGTTGCACAAAATGTCCAAATGTATGAGTGAATGTTTTATTGTTGAAATGAGATGTTTTATGGAAAATGTTTATAAATAATAAA

Function

symbol description
gpr186 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in female organism. Orthologous to human GPR3 (G protein-coupled receptor 3).
gpr6 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane.
gpr3 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in several processes, including G protein-coupled receptor signaling pathway; negative regulation of meiotic cell cycle process involved in oocyte maturation; and positive regulation of cold-induced thermogenesis. Predicted to act upstream of or within regulation of meiotic nuclear division. Predicted to be located in nuclear membrane. Predicted to be active in cytoplasm and plasma membrane.

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_01115294_01116274.mRNA True 2130 mRNA 0.45 1 1114693 1116822

Neighbor

gene id symbol gene type direction distance location
CI01000054_00979998_00989171 TCEB3 coding downstream 125522 979998 ~ 989171 (-)
CI01000054_00974025_00979306 PITHD1 coding downstream 135387 973900 ~ 979306 (-)
CI01000054_00965111_00970121 LYPLA2, LYPA2 coding downstream 144572 964642 ~ 970121 (-)
CI01000054_00929337_00955240 ANKIB1A coding downstream 159019 929132 ~ 955674 (-)
CI01000054_00924015_00926256 GATAD1 coding downstream 188437 923734 ~ 926256 (-)
CI01000054_01151083_01156699 FAM83HB coding upstream 33902 1150724 ~ 1158172 (-)
CI01000054_01203148_01209012 PPT1 coding upstream 86083 1202905 ~ 1209135 (-)
CI01000054_01246516_01250511 KLHL43 coding upstream 128059 1244881 ~ 1251249 (-)
CI01000054_01257527_01259314 NA coding upstream 140705 1257527 ~ 1259314 (-)
CI01000054_01266491_01275814 NA coding upstream 148538 1265360 ~ 1275814 (-)
G230356 NA non-coding downstream 3175 1111266 ~ 1111518 (-)
G230346 NA non-coding downstream 50732 1063761 ~ 1063961 (-)
G230344 NA non-coding downstream 51779 1062613 ~ 1062914 (-)
G230343 NA non-coding downstream 52801 1061572 ~ 1061892 (-)
G230189 NA non-coding downstream 57251 1055550 ~ 1057442 (-)
G230251 NA non-coding upstream 27352 1144174 ~ 1144586 (-)
G230380 NA non-coding upstream 51668 1168490 ~ 1168820 (-)
G230178 NA non-coding upstream 109601 1185533 ~ 1230135 (-)
G230216 NA non-coding upstream 114336 1231158 ~ 1231451 (-)
G230241 NA non-coding upstream 119003 1235825 ~ 1238155 (-)
G230923 NA other upstream 1720415 2837237 ~ 2837682 (-)
CI01000054_02857402_02860451 NA other upstream 1737319 2857402 ~ 2860573 (-)
G230908 NA other upstream 1940826 3057648 ~ 3063343 (-)
G231645 NA other upstream 2865025 3981847 ~ 3982823 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015025 gpr186 coding NC_007130.7 CM002903.2 43547465 ~ 43552252 (-)