G232042


Basic Information

Item Value
gene id G232042
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 4735397 ~ 4735780 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU263313
TGTAGCAAAGTTCAGTATTCAGGAAGGAAGAGGACAGGGTCGGCTTGACTACTGACTGCTTTTTATTTGCAATAATTCTCACAATTCAAAACAAAAGGGGTGCAGACAGGCACAAAGCGGTCACAAATCATTCAGAAGTCTCTCACTCGTAGATCACCAGCGGGGCAGCAGTCAGTAGTCCGTCTCTCTCTCTCCCACACCTGTTTCTCCTGGTGTTATATACTCTCTCCACACCAATTACTGAAACAAGAGACAGGTGTTCGTCATTTGCATTTAACCCACTCACTCACCGTTCGTCTCCTGACTCTCTCTCCCGCTGCCGACTCCGCTGAACCACGCCCCCCTCGCCACAGACCCCCACCGCCTGACTCAGGCCGGGGAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263313 True 384 lncRNA 0.52 1 4735397 4735780

Neighbor

gene id symbol gene type direction distance location
CI01000054_04658039_04659082 NA coding upstream 75696 4657991 ~ 4659701 (+)
CI01000054_04453321_04456780 ILF2, ILF2.L coding upstream 278289 4453321 ~ 4457108 (+)
CI01000054_04372172_04374454 NA coding upstream 360496 4371425 ~ 4374901 (+)
CI01000054_04248925_04249335 NA coding upstream 485810 4248359 ~ 4249587 (+)
CI01000054_03955331_03962388 NA coding upstream 773002 3955331 ~ 3962395 (+)
CI01000054_04924205_04945546 NA coding downstream 188379 4924159 ~ 4945841 (+)
CI01000054_04962081_04977729 NA coding downstream 226150 4961930 ~ 4977937 (+)
CI01000054_05145255_05217807 CSMD2 coding downstream 409331 5145111 ~ 5217811 (+)
CI01000054_05402279_05408977 TRAPPC3.S, TRAPPC3, TPPC3 coding downstream 665667 5401447 ~ 5409085 (+)
CI01000054_05409518_05413525 NA coding downstream 673522 5409302 ~ 5413987 (+)
G232014 NA non-coding upstream 50244 4682432 ~ 4685153 (+)
G231895 NA non-coding upstream 259693 4475120 ~ 4475704 (+)
G231884 NA non-coding upstream 339111 4396021 ~ 4396286 (+)
G231883 NA non-coding upstream 341871 4393294 ~ 4393526 (+)
G231832 NA non-coding upstream 452250 4282516 ~ 4283147 (+)
G232048 NA non-coding downstream 24203 4759983 ~ 4760217 (+)
G232050 NA non-coding downstream 36958 4772738 ~ 4772979 (+)
G232052 NA non-coding downstream 40890 4776670 ~ 4776987 (+)
G232077 NA non-coding downstream 100499 4836279 ~ 4836518 (+)
G232094 NA non-coding downstream 156977 4892757 ~ 4893042 (+)
G231863 NA other upstream 284667 4407152 ~ 4450730 (+)
CI01000054_03848427_03914231 NA other upstream 821851 3848427 ~ 3914231 (+)
G230689 NA other upstream 1648005 3078502 ~ 3087392 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 2431015 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 3008604 1725627 ~ 1726793 (+)
CI01000054_05608892_05634793 RNF19B other downstream 887235 5608457 ~ 5634804 (+)
G232558 NA other downstream 1257880 5993660 ~ 6041863 (+)
CI01000054_06305908_06312122 NA other downstream 1568527 6305908 ~ 6312163 (+)
G232659 NA other downstream 1639070 6374850 ~ 6375894 (+)
G232870 NA other downstream 2152132 6887912 ~ 6888503 (+)

Expression


Co-expression Network